Analysis of interatomic Contacts of Structural Units in PDB entry:
7PR0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7PR0 entry

There are 7 chains in PDB entry 7PR0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	HIS 329	CYS 525
L	ASP 1	CYS 221
H	VAL 2	PRO 229
A	HIS 328	GLY 526
B	ASP 1	GLY 219
C	VAL 2	PRO 229
D	HIS 329	ARG 346

There are 47 helices in PDB entry 7PR0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	337	343	Right-handed alpha
Helix 2	AA2	E	349	353	Right-handed 310
Helix 3	AA3	E	364	370	Right-handed alpha
Helix 4	AA4	E	383	387	Right-handed 310
Helix 5	AA5	E	405	410	Right-handed 310
Helix 6	AA6	E	416	422	Right-handed alpha
Helix 7	AA7	E	438	443	Right-handed alpha
Helix 8	AA8	E	502	505	Right-handed 310
Helix 9	AA9	L	84	88	Right-handed 310
Helix 10	AB1	L	128	133	Right-handed alpha
Helix 11	AB2	L	190	195	Right-handed alpha
Helix 12	AB3	H	28	32	Right-handed 310
Helix 13	AB4	H	74	76	Right-handed 310
Helix 14	AB5	H	87	91	Right-handed 310
Helix 15	AB6	H	172	174	Right-handed 310
Helix 16	AB7	H	217	220	Right-handed 310
Helix 17	AB8	A	337	343	Right-handed alpha
Helix 18	AB9	A	349	353	Right-handed 310
Helix 19	AC1	A	364	370	Right-handed alpha
Helix 20	AC2	A	383	387	Right-handed 310
Helix 21	AC3	A	405	410	Right-handed 310
Helix 22	AC4	A	416	422	Right-handed alpha
Helix 23	AC5	A	438	443	Right-handed alpha
Helix 24	AC6	B	84	88	Right-handed 310
Helix 25	AC7	B	128	133	Right-handed alpha
Helix 26	AC8	B	190	195	Right-handed alpha
Helix 27	AC9	C	28	32	Right-handed 310
Helix 28	AD1	C	74	76	Right-handed 310
Helix 29	AD2	C	87	91	Right-handed 310
Helix 30	AD3	C	172	174	Right-handed 310
Helix 31	AD4	C	203	205	Right-handed 310
Helix 32	AD5	C	217	220	Right-handed 310
Helix 33	AD6	D	337	343	Right-handed alpha
Helix 34	AD7	D	349	353	Right-handed 310
Helix 35	AD8	D	364	370	Right-handed alpha
Helix 36	AD9	D	383	387	Right-handed 310
Helix 37	AE1	D	405	410	Right-handed 310
Helix 38	AE2	D	416	422	Right-handed alpha
Helix 39	AE3	D	438	443	Right-handed alpha
Helix 40	AE4	D	502	505	Right-handed 310
Helix 41	AE5	F	84	88	Right-handed 310
Helix 42	AE6	F	128	135	Right-handed alpha
Helix 43	AE7	F	190	195	Right-handed alpha
Helix 44	AE8	G	28	32	Right-handed 310
Helix 45	AE9	G	74	76	Right-handed 310
Helix 46	AF1	G	87	91	Right-handed 310
Helix 47	AF2	G	216	220	Right-handed 310

There are 41 sheets in PDB entry 7PR0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	354	358	first strand
Strand 2	E	392	403	anti-parallel
Strand 3	E	507	517	anti-parallel
Strand 4	E	431	437	anti-parallel
Strand 5	E	376	380	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	452	454	first strand
Strand 2	E	492	494	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	473	474	first strand
Strand 2	E	488	489	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	7	first strand
Strand 2	L	19	25	anti-parallel
Strand 3	L	75	80	anti-parallel
Strand 4	L	67	72	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	13	first strand
Strand 2	L	109	113	parallel
Strand 3	L	90	95	anti-parallel
Strand 4	L	38	43	anti-parallel
Strand 5	L	50	54	anti-parallel
Strand 6	L	58	59	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	13	first strand
Strand 2	L	109	113	parallel
Strand 3	L	90	95	anti-parallel
Strand 4	L	104	105	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	121	125	first strand
Strand 2	L	136	146	anti-parallel
Strand 3	L	180	189	anti-parallel
Strand 4	L	166	170	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	160	161	first strand
Strand 2	L	151	157	anti-parallel
Strand 3	L	198	205	anti-parallel
Strand 4	L	212	217	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	7	first strand
Strand 2	H	18	24	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	68	73	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	123	127	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	34	39	anti-parallel
Strand 5	H	45	51	anti-parallel
Strand 6	H	58	60	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	123	127	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	116	119	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	136	140	first strand
Strand 2	H	151	161	anti-parallel
Strand 3	H	192	201	anti-parallel
Strand 4	H	179	181	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	136	140	first strand
Strand 2	H	151	161	anti-parallel
Strand 3	H	192	201	anti-parallel
Strand 4	H	185	186	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	167	170	first strand
Strand 2	H	211	216	anti-parallel
Strand 3	H	221	226	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	358	first strand
Strand 2	A	392	403	anti-parallel
Strand 3	A	507	517	anti-parallel
Strand 4	A	431	437	anti-parallel
Strand 5	A	376	380	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	488	489	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	7	first strand
Strand 2	B	19	25	anti-parallel
Strand 3	B	75	80	anti-parallel
Strand 4	B	67	72	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	13	first strand
Strand 2	B	109	113	parallel
Strand 3	B	90	95	anti-parallel
Strand 4	B	38	43	anti-parallel
Strand 5	B	49	54	anti-parallel
Strand 6	B	58	59	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	13	first strand
Strand 2	B	109	113	parallel
Strand 3	B	90	95	anti-parallel
Strand 4	B	104	105	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	121	125	first strand
Strand 2	B	136	146	anti-parallel
Strand 3	B	180	189	anti-parallel
Strand 4	B	166	170	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	160	162	first strand
Strand 2	B	152	157	anti-parallel
Strand 3	B	199	204	anti-parallel
Strand 4	B	212	216	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	7	first strand
Strand 2	C	18	24	anti-parallel
Strand 3	C	78	83	anti-parallel
Strand 4	C	68	73	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	12	first strand
Strand 2	C	123	127	parallel
Strand 3	C	92	99	anti-parallel
Strand 4	C	34	39	anti-parallel
Strand 5	C	45	51	anti-parallel
Strand 6	C	58	60	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	12	first strand
Strand 2	C	123	127	parallel
Strand 3	C	92	99	anti-parallel
Strand 4	C	116	119	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	140	first strand
Strand 2	C	151	161	anti-parallel
Strand 3	C	192	201	anti-parallel
Strand 4	C	179	181	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	140	first strand
Strand 2	C	151	161	anti-parallel
Strand 3	C	192	201	anti-parallel
Strand 4	C	185	186	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	167	170	first strand
Strand 2	C	211	216	anti-parallel
Strand 3	C	221	226	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	354	357	first strand
Strand 2	D	392	403	anti-parallel
Strand 3	D	507	517	anti-parallel
Strand 4	D	431	437	anti-parallel
Strand 5	D	376	380	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	452	454	first strand
Strand 2	D	492	494	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	473	474	first strand
Strand 2	D	488	489	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	7	first strand
Strand 2	F	19	25	anti-parallel
Strand 3	F	75	80	anti-parallel
Strand 4	F	69	72	anti-parallel

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There are 6 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	13	first strand
Strand 2	F	109	113	parallel
Strand 3	F	90	95	anti-parallel
Strand 4	F	38	43	anti-parallel
Strand 5	F	50	54	anti-parallel
Strand 6	F	58	59	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	13	first strand
Strand 2	F	109	113	parallel
Strand 3	F	90	95	anti-parallel
Strand 4	F	104	105	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	121	125	first strand
Strand 2	F	136	146	anti-parallel
Strand 3	F	180	189	anti-parallel
Strand 4	F	166	170	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	160	162	first strand
Strand 2	F	152	157	anti-parallel
Strand 3	F	199	204	anti-parallel
Strand 4	F	212	216	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	4	7	first strand
Strand 2	G	17	24	anti-parallel
Strand 3	G	78	84	anti-parallel
Strand 4	G	68	73	anti-parallel

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There are 6 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	12	first strand
Strand 2	G	123	127	parallel
Strand 3	G	92	99	anti-parallel
Strand 4	G	34	39	anti-parallel
Strand 5	G	45	51	anti-parallel
Strand 6	G	58	60	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	12	first strand
Strand 2	G	123	127	parallel
Strand 3	G	92	99	anti-parallel
Strand 4	G	116	119	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	136	137	first strand
Strand 2	G	157	161	anti-parallel
Strand 3	G	192	195	anti-parallel
Strand 4	G	185	186	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	167	170	first strand
Strand 2	G	212	215	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7PR0

Analysis of interatomic Contacts of Structural Units in PDB entry:
7PR0