Analysis of interatomic Contacts of Structural Units in PDB entry:
7PRL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PRL entry

There is 1 chain in PDB entry 7PRL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 31CYS 387
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7PRL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
159 162Right-handed 310
Helix 2
AA2
A
176 180Right-handed 310
Helix 3
AA3
A
182 186Right-handed 310
Helix 4
AA4
A
189 196Right-handed alpha
Helix 5
AA5
A
221 230Right-handed alpha
Helix 6
AA6
A
231 235Right-handed 310
Helix 7
AA7
A
242 257Right-handed alpha
Helix 8
AA8
A
261 278Right-handed alpha
Helix 9
AA9
A
318 323Right-handed 310
Helix 10
AB1
A
347 351Right-handed 310
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There are 6 sheets in PDB entry 7PRL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
44 46anti-parallel
Strand 3
A
36 40anti-parallel
Strand 4
A
153 157anti-parallel
Strand 5
A
143 147anti-parallel
Strand 6
A
135 139anti-parallel
Strand 7
A
126 130anti-parallel
Strand 8
A
121 123anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 65first strand
Strand 2
A
74 79anti-parallel
Strand 3
A
93 98anti-parallel
Strand 4
A
101 106anti-parallel
Strand 5
A
110 112anti-parallel
Strand 6
A
115 116anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 305first strand
Strand 2
A
326 330anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 337first strand
Strand 2
A
345 346anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 355first strand
Strand 2
A
358 360anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 367first strand
Strand 2
A
371 376anti-parallel
Strand 3
A
379 384anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il