Analysis of interatomic Contacts of Structural Units in PDB entry:
7PRU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PRU entry

There are 2 chains in PDB entry 7PRU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 95MET 676
B
 ALA 95MET 676
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 7PRU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
95 105Right-handed alpha
Helix 2
AA2
A
109 144Right-handed alpha
Helix 3
AA3
A
154 160Right-handed alpha
Helix 4
AA4
A
160 206Right-handed alpha
Helix 5
AA5
A
207 214Right-handed alpha
Helix 6
AA6
A
215 240Right-handed alpha
Helix 7
AA7
A
240 260Right-handed alpha
Helix 8
AA8
A
260 309Right-handed alpha
Helix 9
AA9
A
309 316Right-handed alpha
Helix 10
AB1
A
318 372Right-handed alpha
Helix 11
AB2
A
377 391Right-handed alpha
Helix 12
AB3
A
392 397Right-handed 310
Helix 13
AB4
A
398 418Right-handed alpha
Helix 14
AB5
A
481 488Right-handed alpha
Helix 15
AB6
A
504 508Right-handed 310
Helix 16
AB7
A
509 516Right-handed alpha
Helix 17
AB8
A
530 537Right-handed alpha
Helix 18
AB9
A
543 554Right-handed alpha
Helix 19
AC1
A
556 562Right-handed alpha
Helix 20
AC2
A
565 569Right-handed 310
Helix 21
AC3
A
579 595Right-handed alpha
Helix 22
AC4
A
610 625Right-handed alpha
Helix 23
AC5
A
660 665Right-handed alpha
Helix 24
AC6
A
670 674Right-handed 310
Helix 25
AC7
B
96 105Right-handed alpha
Helix 26
AC8
B
109 144Right-handed alpha
Helix 27
AC9
B
154 160Right-handed alpha
Helix 28
AD1
B
160 206Right-handed alpha
Helix 29
AD2
B
207 214Right-handed alpha
Helix 30
AD3
B
215 240Right-handed alpha
Helix 31
AD4
B
240 260Right-handed alpha
Helix 32
AD5
B
260 309Right-handed alpha
Helix 33
AD6
B
309 316Right-handed alpha
Helix 34
AD7
B
318 372Right-handed alpha
Helix 35
AD8
B
377 391Right-handed alpha
Helix 36
AD9
B
392 397Right-handed 310
Helix 37
AE1
B
398 418Right-handed alpha
Helix 38
AE2
B
481 488Right-handed alpha
Helix 39
AE3
B
504 508Right-handed 310
Helix 40
AE4
B
509 516Right-handed alpha
Helix 41
AE5
B
530 537Right-handed alpha
Helix 42
AE6
B
543 554Right-handed alpha
Helix 43
AE7
B
556 562Right-handed alpha
Helix 44
AE8
B
565 569Right-handed 310
Helix 45
AE9
B
579 595Right-handed alpha
Helix 46
AF1
B
610 625Right-handed alpha
Helix 47
AF2
B
660 665Right-handed alpha
Helix 48
AF3
B
670 674Right-handed 310
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There are 4 sheets in PDB entry 7PRU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 464first strand
Strand 2
A
441 448anti-parallel
Strand 3
A
495 500anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
517 520first strand
Strand 2
A
598 602parallel
Strand 3
A
631 634parallel
Strand 4
A
469 473parallel
Strand 5
A
646 651parallel
Strand 6
A
654 659anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
457 464first strand
Strand 2
B
441 448anti-parallel
Strand 3
B
495 500anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
517 520first strand
Strand 2
B
598 602parallel
Strand 3
B
631 634parallel
Strand 4
B
469 473parallel
Strand 5
B
646 651parallel
Strand 6
B
654 659anti-parallel
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