Analysis of interatomic Contacts of Structural Units in PDB entry:
7PSL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PSL entry

There are 2 chains in PDB entry 7PSL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 92TRP 691
B
 LEU 92TRP 691
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 7PSL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
92 99Right-handed alpha
Helix 2
AA2
A
104 140Right-handed alpha
Helix 3
AA3
A
151 199Right-handed alpha
Helix 4
AA4
A
203 209Right-handed alpha
Helix 5
AA5
A
210 234Right-handed alpha
Helix 6
AA6
A
236 254Right-handed alpha
Helix 7
AA7
A
255 304Right-handed alpha
Helix 8
AA8
A
304 311Right-handed alpha
Helix 9
AA9
A
314 365Right-handed alpha
Helix 10
AB1
A
366 368Right-handed 310
Helix 11
AB2
A
371 387Right-handed alpha
Helix 12
AB3
A
388 412Right-handed alpha
Helix 13
AB4
A
477 483Right-handed alpha
Helix 14
AB5
A
504 510Right-handed alpha
Helix 15
AB6
A
526 532Right-handed alpha
Helix 16
AB7
A
538 549Right-handed alpha
Helix 17
AB8
A
551 556Right-handed alpha
Helix 18
AB9
A
574 590Right-handed alpha
Helix 19
AC1
A
604 619Right-handed alpha
Helix 20
AC2
A
632 636Right-handed 310
Helix 21
AC3
A
655 661Right-handed alpha
Helix 22
AC4
A
665 691Right-handed alpha
Helix 23
AC5
B
93 99Right-handed alpha
Helix 24
AC6
B
104 140Right-handed alpha
Helix 25
AC7
B
151 199Right-handed alpha
Helix 26
AC8
B
203 209Right-handed alpha
Helix 27
AC9
B
210 234Right-handed alpha
Helix 28
AD1
B
236 254Right-handed alpha
Helix 29
AD2
B
255 304Right-handed alpha
Helix 30
AD3
B
304 311Right-handed alpha
Helix 31
AD4
B
314 365Right-handed alpha
Helix 32
AD5
B
366 368Right-handed 310
Helix 33
AD6
B
371 387Right-handed alpha
Helix 34
AD7
B
388 412Right-handed alpha
Helix 35
AD8
B
477 483Right-handed alpha
Helix 36
AD9
B
504 510Right-handed alpha
Helix 37
AE1
B
526 532Right-handed alpha
Helix 38
AE2
B
538 549Right-handed alpha
Helix 39
AE3
B
551 556Right-handed alpha
Helix 40
AE4
B
574 590Right-handed alpha
Helix 41
AE5
B
604 619Right-handed alpha
Helix 42
AE6
B
632 636Right-handed 310
Helix 43
AE7
B
655 661Right-handed alpha
Helix 44
AE8
B
665 691Right-handed alpha
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There are 6 sheets in PDB entry 7PSL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
438 439first strand
Strand 2
A
492 493anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
441 443first strand
Strand 2
A
452 455anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
512 515first strand
Strand 2
A
593 597parallel
Strand 3
A
625 629parallel
Strand 4
A
465 468parallel
Strand 5
A
642 646parallel
Strand 6
A
649 650anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
438 439first strand
Strand 2
B
492 493anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
441 443first strand
Strand 2
B
452 455anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
512 515first strand
Strand 2
B
593 597parallel
Strand 3
B
625 629parallel
Strand 4
B
465 468parallel
Strand 5
B
642 646parallel
Strand 6
B
649 650anti-parallel
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