Analysis of interatomic Contacts of Structural Units in PDB entry:
7PSM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PSM entry

There are 2 chains in PDB entry 7PSM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 92ASP 676
B
 LEU 92ASP 676
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 7PSM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
93 100Right-handed alpha
Helix 2
AA2
A
104 140Right-handed alpha
Helix 3
AA3
A
151 201Right-handed alpha
Helix 4
AA4
A
202 208Right-handed alpha
Helix 5
AA5
A
210 235Right-handed alpha
Helix 6
AA6
A
235 254Right-handed alpha
Helix 7
AA7
A
256 304Right-handed alpha
Helix 8
AA8
A
304 310Right-handed alpha
Helix 9
AA9
A
313 367Right-handed alpha
Helix 10
AB1
A
371 396Right-handed alpha
Helix 11
AB2
A
399 414Right-handed alpha
Helix 12
AB3
A
475 483Right-handed alpha
Helix 13
AB4
A
504 510Right-handed alpha
Helix 14
AB5
A
525 531Right-handed alpha
Helix 15
AB6
A
538 547Right-handed alpha
Helix 16
AB7
A
551 558Right-handed alpha
Helix 17
AB8
A
567 571Right-handed 310
Helix 18
AB9
A
574 590Right-handed alpha
Helix 19
AC1
A
604 617Right-handed alpha
Helix 20
AC2
A
655 661Right-handed alpha
Helix 21
AC3
A
665 676Right-handed alpha
Helix 22
AC4
B
93 100Right-handed alpha
Helix 23
AC5
B
104 140Right-handed alpha
Helix 24
AC6
B
151 201Right-handed alpha
Helix 25
AC7
B
202 208Right-handed alpha
Helix 26
AC8
B
210 235Right-handed alpha
Helix 27
AC9
B
235 254Right-handed alpha
Helix 28
AD1
B
256 304Right-handed alpha
Helix 29
AD2
B
304 310Right-handed alpha
Helix 30
AD3
B
313 367Right-handed alpha
Helix 31
AD4
B
371 396Right-handed alpha
Helix 32
AD5
B
399 414Right-handed alpha
Helix 33
AD6
B
475 483Right-handed alpha
Helix 34
AD7
B
504 510Right-handed alpha
Helix 35
AD8
B
525 531Right-handed alpha
Helix 36
AD9
B
538 547Right-handed alpha
Helix 37
AE1
B
551 558Right-handed alpha
Helix 38
AE2
B
567 571Right-handed 310
Helix 39
AE3
B
574 590Right-handed alpha
Helix 40
AE4
B
604 617Right-handed alpha
Helix 41
AE5
B
655 661Right-handed alpha
Helix 42
AE6
B
665 676Right-handed alpha
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There are 4 sheets in PDB entry 7PSM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
455 459first strand
Strand 2
A
436 442anti-parallel
Strand 3
A
490 495anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
514 515first strand
Strand 2
A
595 597parallel
Strand 3
A
627 629parallel
Strand 4
A
465 469parallel
Strand 5
A
641 645parallel
Strand 6
A
653 654anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
455 459first strand
Strand 2
B
436 442anti-parallel
Strand 3
B
490 495anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
514 515first strand
Strand 2
B
595 597parallel
Strand 3
B
627 629parallel
Strand 4
B
465 469parallel
Strand 5
B
641 645parallel
Strand 6
B
653 654anti-parallel
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