Analysis of interatomic Contacts of Structural Units in PDB entry:
7PT2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PT2 entry

There are 2 chains in PDB entry 7PT2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 15GLU 588
B
 ARG 16ILE 108
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 70 helices in PDB entry 7PT2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 32Right-handed alpha
Helix 2
AA2
A
45 55Right-handed alpha
Helix 3
AA3
A
64 80Right-handed alpha
Helix 4
AA4
A
90 95Right-handed alpha
Helix 5
AA5
A
96 107Right-handed alpha
Helix 6
AA6
A
118 122Right-handed 310
Helix 7
AA7
A
131 137Right-handed alpha
Helix 8
AA8
A
138 140Right-handed 310
Helix 9
AA9
A
148 150Right-handed 310
Helix 10
AB1
A
151 165Right-handed alpha
Helix 11
AB2
A
179 183Right-handed alpha
Helix 12
AB3
A
187 191Right-handed 310
Helix 13
AB4
A
192 197Right-handed alpha
Helix 14
AB5
A
207 221Right-handed alpha
Helix 15
AB6
A
229 234Right-handed alpha
Helix 16
AB7
A
237 248Right-handed alpha
Helix 17
AB8
A
254 258Right-handed 310
Helix 18
AB9
A
272 280Right-handed alpha
Helix 19
AC1
A
291 298Right-handed 310
Helix 20
AC2
A
313 317Right-handed 310
Helix 21
AC3
A
330 342Right-handed alpha
Helix 22
AC4
A
349 370Right-handed alpha
Helix 23
AC5
A
383 394Right-handed alpha
Helix 24
AC6
A
399 402Right-handed 310
Helix 25
AC7
A
410 420Right-handed alpha
Helix 26
AC8
A
437 449Right-handed alpha
Helix 27
AC9
A
460 467Right-handed alpha
Helix 28
AD1
A
469 476Right-handed alpha
Helix 29
AD2
A
490 502Right-handed alpha
Helix 30
AD3
A
513 521Right-handed alpha
Helix 31
AD4
A
530 532Right-handed 310
Helix 32
AD5
A
533 544Right-handed alpha
Helix 33
AD6
A
559 564Right-handed alpha
Helix 34
AD7
A
565 569Right-handed 310
Helix 35
AD8
A
575 588Right-handed alpha
Helix 36
AD9
B
21 32Right-handed alpha
Helix 37
AE1
B
45 55Right-handed alpha
Helix 38
AE2
B
64 80Right-handed alpha
Helix 39
AE3
B
90 95Right-handed alpha
Helix 40
AE4
B
96 107Right-handed alpha
Helix 41
AE5
B
118 122Right-handed 310
Helix 42
AE6
B
131 137Right-handed alpha
Helix 43
AE7
B
138 140Right-handed 310
Helix 44
AE8
B
148 150Right-handed 310
Helix 45
AE9
B
151 165Right-handed alpha
Helix 46
AF1
B
179 183Right-handed alpha
Helix 47
AF2
B
187 191Right-handed 310
Helix 48
AF3
B
192 197Right-handed alpha
Helix 49
AF4
B
207 221Right-handed alpha
Helix 50
AF5
B
229 234Right-handed alpha
Helix 51
AF6
B
237 248Right-handed alpha
Helix 52
AF7
B
254 258Right-handed 310
Helix 53
AF8
B
272 280Right-handed alpha
Helix 54
AF9
B
291 298Right-handed 310
Helix 55
AG1
B
313 317Right-handed 310
Helix 56
AG2
B
330 342Right-handed alpha
Helix 57
AG3
B
349 370Right-handed alpha
Helix 58
AG4
B
383 394Right-handed alpha
Helix 59
AG5
B
399 402Right-handed 310
Helix 60
AG6
B
410 420Right-handed alpha
Helix 61
AG7
B
437 449Right-handed alpha
Helix 62
AG8
B
460 467Right-handed alpha
Helix 63
AG9
B
469 476Right-handed alpha
Helix 64
AH1
B
490 502Right-handed alpha
Helix 65
AH2
B
513 521Right-handed alpha
Helix 66
AH3
B
530 532Right-handed 310
Helix 67
AH4
B
533 544Right-handed alpha
Helix 68
AH5
B
559 564Right-handed alpha
Helix 69
AH6
B
565 569Right-handed 310
Helix 70
AH7
B
575 587Right-handed alpha
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There are 8 sheets in PDB entry 7PT2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 20first strand
Strand 2
A
185 186anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 61first strand
Strand 2
A
36 39parallel
Strand 3
A
83 87parallel
Strand 4
A
110 116parallel
Strand 5
A
172 178parallel
Strand 6
A
142 145parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 252first strand
Strand 2
A
224 228parallel
Strand 3
A
282 286parallel
Strand 4
A
306 311parallel
Strand 5
A
325 328parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
425 427first strand
Strand 2
A
404 408parallel
Strand 3
A
454 459parallel
Strand 4
A
480 486parallel
Strand 5
A
547 552parallel
Strand 6
A
524 528parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 20first strand
Strand 2
B
185 186anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 61first strand
Strand 2
B
36 39parallel
Strand 3
B
83 87parallel
Strand 4
B
110 116parallel
Strand 5
B
172 178parallel
Strand 6
B
143 145parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
250 252first strand
Strand 2
B
224 228parallel
Strand 3
B
282 286parallel
Strand 4
B
306 311parallel
Strand 5
B
325 328parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
425 427first strand
Strand 2
B
404 408parallel
Strand 3
B
454 459parallel
Strand 4
B
480 486parallel
Strand 5
B
547 552parallel
Strand 6
B
524 528parallel
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