Analysis of interatomic Contacts of Structural Units in PDB entry:
7PTY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PTY entry

There are 2 chains in PDB entry 7PTY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 50ASN 928
B
 SER 50ASN 928
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 88 helices in PDB entry 7PTY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
50 64Right-handed alpha
Helix 2
AA2
A
73 90Right-handed alpha
Helix 3
AA3
A
94 98Right-handed 310
Helix 4
AA4
A
107 122Right-handed alpha
Helix 5
AA5
A
131 160Right-handed alpha
Helix 6
AA6
A
168 190Right-handed alpha
Helix 7
AA7
A
193 215Right-handed alpha
Helix 8
AA8
A
215 236Right-handed alpha
Helix 9
AA9
A
247 281Right-handed alpha
Helix 10
AB1
A
284 307Right-handed alpha
Helix 11
AB2
A
312 326Right-handed alpha
Helix 12
AB3
A
332 353Right-handed alpha
Helix 13
AB4
A
428 432Right-handed 310
Helix 14
AB5
A
461 475Right-handed alpha
Helix 15
AB6
A
477 492Right-handed alpha
Helix 16
AB7
A
503 513Right-handed alpha
Helix 17
AB8
A
515 523Right-handed alpha
Helix 18
AB9
A
539 548Right-handed alpha
Helix 19
AC1
A
549 558Right-handed alpha
Helix 20
AC2
A
573 582Right-handed alpha
Helix 21
AC3
A
583 593Right-handed alpha
Helix 22
AC4
A
607 616Right-handed alpha
Helix 23
AC5
A
619 626Right-handed alpha
Helix 24
AC6
A
640 649Right-handed alpha
Helix 25
AC7
A
650 661Right-handed alpha
Helix 26
AC8
A
673 682Right-handed alpha
Helix 27
AC9
A
683 694Right-handed alpha
Helix 28
AD1
A
709 718Right-handed alpha
Helix 29
AD2
A
719 728Right-handed alpha
Helix 30
AD3
A
738 742Right-handed 310
Helix 31
AD4
A
743 752Right-handed alpha
Helix 32
AD5
A
753 764Right-handed alpha
Helix 33
AD6
A
776 783Right-handed alpha
Helix 34
AD7
A
787 797Right-handed alpha
Helix 35
AD8
A
809 818Right-handed alpha
Helix 36
AD9
A
819 829Right-handed alpha
Helix 37
AE1
A
842 851Right-handed alpha
Helix 38
AE2
A
852 862Right-handed alpha
Helix 39
AE3
A
875 883Right-handed alpha
Helix 40
AE4
A
885 894Right-handed alpha
Helix 41
AE5
A
904 907Right-handed 310
Helix 42
AE6
A
908 916Right-handed alpha
Helix 43
AE7
A
922 927Right-handed alpha
Helix 44
AE8
B
51 65Right-handed alpha
Helix 45
AE9
B
73 89Right-handed alpha
Helix 46
AF1
B
108 122Right-handed alpha
Helix 47
AF2
B
129 131Right-handed 310
Helix 48
AF3
B
132 159Right-handed alpha
Helix 49
AF4
B
160 162Right-handed 310
Helix 50
AF5
B
167 190Right-handed alpha
Helix 51
AF6
B
193 213Right-handed alpha
Helix 52
AF7
B
218 236Right-handed alpha
Helix 53
AF8
B
246 281Right-handed alpha
Helix 54
AF9
B
284 327Right-handed alpha
Helix 55
AG1
B
332 351Right-handed alpha
Helix 56
AG2
B
352 355Right-handed 310
Helix 57
AG3
B
428 432Right-handed 310
Helix 58
AG4
B
461 474Right-handed alpha
Helix 59
AG5
B
477 490Right-handed alpha
Helix 60
AG6
B
503 513Right-handed alpha
Helix 61
AG7
B
514 522Right-handed alpha
Helix 62
AG8
B
525 532Right-handed alpha
Helix 63
AG9
B
539 546Right-handed alpha
Helix 64
AH1
B
549 559Right-handed alpha
Helix 65
AH2
B
573 580Right-handed alpha
Helix 66
AH3
B
583 593Right-handed alpha
Helix 67
AH4
B
607 613Right-handed alpha
Helix 68
AH5
B
617 626Right-handed alpha
Helix 69
AH6
B
640 649Right-handed alpha
Helix 70
AH7
B
650 661Right-handed alpha
Helix 71
AH8
B
673 682Right-handed alpha
Helix 72
AH9
B
683 694Right-handed alpha
Helix 73
AI1
B
696 701Right-handed 310
Helix 74
AI2
B
709 717Right-handed alpha
Helix 75
AI3
B
721 728Right-handed alpha
Helix 76
AI4
B
743 752Right-handed alpha
Helix 77
AI5
B
753 763Right-handed alpha
Helix 78
AI6
B
776 784Right-handed alpha
Helix 79
AI7
B
787 796Right-handed alpha
Helix 80
AI8
B
809 818Right-handed alpha
Helix 81
AI9
B
819 829Right-handed alpha
Helix 82
AJ1
B
842 851Right-handed alpha
Helix 83
AJ2
B
852 862Right-handed alpha
Helix 84
AJ3
B
875 884Right-handed alpha
Helix 85
AJ4
B
885 895Right-handed alpha
Helix 86
AJ5
B
904 906Right-handed 310
Helix 87
AJ6
B
907 916Right-handed alpha
Helix 88
AJ7
B
920 927Right-handed alpha
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There are 2 sheets in PDB entry 7PTY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
396 401first strand
Strand 2
A
438 443anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
406 408first strand
Strand 2
B
399 403anti-parallel
Strand 3
B
438 440anti-parallel
Strand 4
B
453 455anti-parallel
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