Analysis of interatomic Contacts of Structural Units in PDB entry:
7PU5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7PU5 entry

There are 6 chains in PDB entry 7PU5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 66	HIS 307
B	LYS 291	GLU 529
C	GLY 66	HIS 307
D	LYS 291	GLU 529
E	LYS 68	HIS 307
F	LYS 291	PRO 323

There are106 helices in PDB entry 7PU5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	71	73	Right-handed 310
Helix 2	AA2	A	86	94	Right-handed alpha
Helix 3	AA3	A	95	98	Right-handed 310
Helix 4	AA4	A	118	130	Right-handed alpha
Helix 5	AA5	A	160	169	Right-handed alpha
Helix 6	AA6	A	197	211	Right-handed alpha
Helix 7	AA7	A	237	241	Right-handed 310
Helix 8	AA8	A	244	251	Right-handed alpha
Helix 9	AA9	A	262	305	Right-handed alpha
Helix 10	AB1	B	294	296	Right-handed 310
Helix 11	AB2	B	309	317	Right-handed alpha
Helix 12	AB3	B	341	353	Right-handed alpha
Helix 13	AB4	B	383	392	Right-handed alpha
Helix 14	AB5	B	393	395	Right-handed 310
Helix 15	AB6	B	420	434	Right-handed alpha
Helix 16	AB7	B	460	465	Right-handed alpha
Helix 17	AB8	B	467	474	Right-handed alpha
Helix 18	AB9	B	485	528	Right-handed alpha
Helix 19	AC1	C	71	73	Right-handed 310
Helix 20	AC2	C	86	94	Right-handed alpha
Helix 21	AC3	C	118	130	Right-handed alpha
Helix 22	AC4	C	160	169	Right-handed alpha
Helix 23	AC5	C	197	211	Right-handed alpha
Helix 24	AC6	C	237	241	Right-handed 310
Helix 25	AC7	C	244	251	Right-handed alpha
Helix 26	AC8	C	262	305	Right-handed alpha
Helix 27	AC9	D	294	296	Right-handed 310
Helix 28	AD1	D	309	317	Right-handed alpha
Helix 29	AD2	D	341	353	Right-handed alpha
Helix 30	AD3	D	383	392	Right-handed alpha
Helix 31	AD4	D	393	395	Right-handed 310
Helix 32	AD5	D	420	434	Right-handed alpha
Helix 33	AD6	D	460	465	Right-handed alpha
Helix 34	AD7	D	467	474	Right-handed alpha
Helix 35	AD8	D	485	528	Right-handed alpha
Helix 36	AD9	E	71	73	Right-handed 310
Helix 37	AE1	E	86	94	Right-handed alpha
Helix 38	AE2	E	118	130	Right-handed alpha
Helix 39	AE3	E	160	169	Right-handed alpha
Helix 40	AE4	E	197	211	Right-handed alpha
Helix 41	AE5	E	237	241	Right-handed 310
Helix 42	AE6	E	244	251	Right-handed alpha
Helix 43	AE7	E	262	305	Right-handed alpha
Helix 44	AE8	F	294	296	Right-handed 310
Helix 45	AE9	F	309	317	Right-handed alpha
Helix 46	AF1	F	318	321	Right-handed 310
Helix 47	AF2	F	341	353	Right-handed alpha
Helix 48	AF3	F	383	392	Right-handed alpha
Helix 49	AF4	F	393	395	Right-handed 310
Helix 50	AF5	F	420	434	Right-handed alpha
Helix 51	AF6	F	460	465	Right-handed alpha
Helix 52	AF7	F	467	474	Right-handed alpha
Helix 53	AF8	F	485	528	Right-handed alpha
Helix 54	AF9	G	71	73	Right-handed 310
Helix 55	AG1	G	86	94	Right-handed alpha
Helix 56	AG2	G	118	130	Right-handed alpha
Helix 57	AG3	G	160	169	Right-handed alpha
Helix 58	AG4	G	197	211	Right-handed alpha
Helix 59	AG5	G	237	241	Right-handed 310
Helix 60	AG6	G	244	251	Right-handed alpha
Helix 61	AG7	G	262	305	Right-handed alpha
Helix 62	AG8	H	294	296	Right-handed 310
Helix 63	AG9	H	309	317	Right-handed alpha
Helix 64	AH1	H	318	321	Right-handed 310
Helix 65	AH2	H	341	353	Right-handed alpha
Helix 66	AH3	H	383	392	Right-handed alpha
Helix 67	AH4	H	393	395	Right-handed 310
Helix 68	AH5	H	420	434	Right-handed alpha
Helix 69	AH6	H	460	465	Right-handed alpha
Helix 70	AH7	H	467	474	Right-handed alpha
Helix 71	AH8	H	485	528	Right-handed alpha
Helix 72	AH9	I	71	73	Right-handed 310
Helix 73	AI1	I	86	94	Right-handed alpha
Helix 74	AI2	I	118	130	Right-handed alpha
Helix 75	AI3	I	160	169	Right-handed alpha
Helix 76	AI4	I	197	211	Right-handed alpha
Helix 77	AI5	I	237	241	Right-handed 310
Helix 78	AI6	I	244	251	Right-handed alpha
Helix 79	AI7	I	262	304	Right-handed alpha
Helix 80	AI8	J	294	296	Right-handed 310
Helix 81	AI9	J	309	317	Right-handed alpha
Helix 82	AJ1	J	341	353	Right-handed alpha
Helix 83	AJ2	J	383	392	Right-handed alpha
Helix 84	AJ3	J	393	395	Right-handed 310
Helix 85	AJ4	J	420	434	Right-handed alpha
Helix 86	AJ5	J	460	465	Right-handed alpha
Helix 87	AJ6	J	467	474	Right-handed alpha
Helix 88	AJ7	J	485	528	Right-handed alpha
Helix 89	AJ8	K	71	73	Right-handed 310
Helix 90	AJ9	K	86	94	Right-handed alpha
Helix 91	AK1	K	118	130	Right-handed alpha
Helix 92	AK2	K	160	169	Right-handed alpha
Helix 93	AK3	K	197	211	Right-handed alpha
Helix 94	AK4	K	237	241	Right-handed 310
Helix 95	AK5	K	244	251	Right-handed alpha
Helix 96	AK6	K	262	304	Right-handed alpha
Helix 97	AK7	L	294	296	Right-handed 310
Helix 98	AK8	L	309	317	Right-handed alpha
Helix 99	AK9	L	318	321	Right-handed 310
Helix 100	AL1	L	341	353	Right-handed alpha
Helix 101	AL2	L	383	392	Right-handed alpha
Helix 102	AL3	L	393	395	Right-handed 310
Helix 103	AL4	L	420	434	Right-handed alpha
Helix 104	AL5	L	460	465	Right-handed alpha
Helix 105	AL6	L	467	474	Right-handed alpha
Helix 106	AL7	L	485	528	Right-handed alpha

There are 48 sheets in PDB entry 7PU5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	100	106	first strand
Strand 2	A	111	116	anti-parallel
Strand 3	A	75	79	anti-parallel
Strand 4	A	140	143	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	134	first strand
Strand 2	A	137	138	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	226	first strand
Strand 2	A	149	153	anti-parallel
Strand 3	A	187	195	anti-parallel
Strand 4	A	174	182	anti-parallel
Strand 5	B	453	454	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	213	214	first strand
Strand 2	B	479	480	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	256	257	first strand
Strand 2	B	436	437	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	326	329	first strand
Strand 2	B	334	338	anti-parallel
Strand 3	B	298	302	anti-parallel
Strand 4	B	363	366	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	356	357	first strand
Strand 2	B	360	361	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	397	404	first strand
Strand 2	B	410	418	anti-parallel
Strand 3	B	372	376	anti-parallel
Strand 4	B	446	449	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	100	106	first strand
Strand 2	C	111	116	anti-parallel
Strand 3	C	75	79	anti-parallel
Strand 4	C	140	143	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	133	134	first strand
Strand 2	C	137	138	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	223	226	first strand
Strand 2	C	149	153	anti-parallel
Strand 3	C	187	195	anti-parallel
Strand 4	C	174	182	anti-parallel
Strand 5	D	453	454	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	213	214	first strand
Strand 2	D	479	480	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	256	257	first strand
Strand 2	D	436	437	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	326	329	first strand
Strand 2	D	334	338	anti-parallel
Strand 3	D	298	302	anti-parallel
Strand 4	D	363	366	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	356	357	first strand
Strand 2	D	360	361	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	397	404	first strand
Strand 2	D	410	418	anti-parallel
Strand 3	D	372	376	anti-parallel
Strand 4	D	446	449	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	100	105	first strand
Strand 2	E	111	116	anti-parallel
Strand 3	E	75	79	anti-parallel
Strand 4	E	140	143	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	133	134	first strand
Strand 2	E	137	138	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	174	181	first strand
Strand 2	E	187	195	anti-parallel
Strand 3	E	149	153	anti-parallel
Strand 4	E	223	226	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	213	214	first strand
Strand 2	F	479	480	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	256	257	first strand
Strand 2	F	436	437	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	326	329	first strand
Strand 2	F	334	338	anti-parallel
Strand 3	F	298	302	anti-parallel
Strand 4	F	363	366	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	356	357	first strand
Strand 2	F	360	361	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	397	404	first strand
Strand 2	F	410	418	anti-parallel
Strand 3	F	372	376	anti-parallel
Strand 4	F	446	449	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	100	105	first strand
Strand 2	G	112	116	anti-parallel
Strand 3	G	75	79	anti-parallel
Strand 4	G	140	143	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	133	134	first strand
Strand 2	G	137	138	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	174	181	first strand
Strand 2	G	187	195	anti-parallel
Strand 3	G	149	153	anti-parallel
Strand 4	G	223	226	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	213	214	first strand
Strand 2	H	479	480	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	256	257	first strand
Strand 2	H	436	437	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	326	329	first strand
Strand 2	H	334	338	anti-parallel
Strand 3	H	298	302	anti-parallel
Strand 4	H	363	366	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	356	357	first strand
Strand 2	H	360	361	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	397	404	first strand
Strand 2	H	410	418	anti-parallel
Strand 3	H	372	376	anti-parallel
Strand 4	H	446	449	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	100	106	first strand
Strand 2	I	111	116	anti-parallel
Strand 3	I	75	79	anti-parallel
Strand 4	I	140	143	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	133	134	first strand
Strand 2	I	137	138	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	223	226	first strand
Strand 2	I	149	153	anti-parallel
Strand 3	I	187	195	anti-parallel
Strand 4	I	174	182	anti-parallel
Strand 5	J	453	454	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	213	214	first strand
Strand 2	J	479	480	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	230	231	first strand
Strand 2	J	397	405	anti-parallel
Strand 3	J	410	418	anti-parallel
Strand 4	J	372	376	anti-parallel
Strand 5	J	446	449	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	256	257	first strand
Strand 2	J	436	437	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	326	329	first strand
Strand 2	J	334	338	anti-parallel
Strand 3	J	298	302	anti-parallel
Strand 4	J	363	366	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	356	357	first strand
Strand 2	J	360	361	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	100	106	first strand
Strand 2	K	111	116	anti-parallel
Strand 3	K	75	79	anti-parallel
Strand 4	K	140	143	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	133	134	first strand
Strand 2	K	137	138	anti-parallel

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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	223	226	first strand
Strand 2	K	149	153	anti-parallel
Strand 3	K	187	195	anti-parallel
Strand 4	K	174	182	anti-parallel
Strand 5	L	453	454	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	213	214	first strand
Strand 2	L	479	480	anti-parallel

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There are 5 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	230	231	first strand
Strand 2	L	397	405	anti-parallel
Strand 3	L	410	418	anti-parallel
Strand 4	L	372	376	anti-parallel
Strand 5	L	446	449	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	256	257	first strand
Strand 2	L	436	437	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	326	329	first strand
Strand 2	L	334	338	anti-parallel
Strand 3	L	298	302	anti-parallel
Strand 4	L	363	366	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	356	357	first strand
Strand 2	L	360	361	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7PU5

Analysis of interatomic Contacts of Structural Units in PDB entry:
7PU5