Analysis of interatomic Contacts of Structural Units in PDB entry:
7PUG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PUG entry

There is 1 chain in PDB entry 7PUG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA -1GLU 838
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 7PUG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 52Right-handed alpha
Helix 2
AA2
A
74 83Right-handed alpha
Helix 3
AA3
A
87 91Right-handed 310
Helix 4
AA4
A
120 136Right-handed alpha
Helix 5
AA5
A
180 191Right-handed alpha
Helix 6
AA6
A
196 210Right-handed alpha
Helix 7
AA7
A
223 228Right-handed alpha
Helix 8
AA8
A
228 239Right-handed alpha
Helix 9
AA9
A
253 259Right-handed alpha
Helix 10
AB1
A
272 288Right-handed alpha
Helix 11
AB2
A
320 343Right-handed alpha
Helix 12
AB3
A
345 349Right-handed 310
Helix 13
AB4
A
356 358Right-handed 310
Helix 14
AB5
A
359 365Right-handed alpha
Helix 15
AB6
A
392 396Right-handed 310
Helix 16
AB7
A
422 436Right-handed alpha
Helix 17
AB8
A
452 465Right-handed alpha
Helix 18
AB9
A
466 469Right-handed 310
Helix 19
AC1
A
473 487Right-handed alpha
Helix 20
AC2
A
490 507Right-handed alpha
Helix 21
AC3
A
523 546Right-handed alpha
Helix 22
AC4
A
547 549Right-handed 310
Helix 23
AC5
A
550 558Right-handed alpha
Helix 24
AC6
A
558 585Right-handed alpha
Helix 25
AC7
A
588 613Right-handed alpha
Helix 26
AC8
A
614 618Right-handed 310
Helix 27
AC9
A
650 654Right-handed 310
Helix 28
AD1
A
766 771Right-handed alpha
Helix 29
AD2
A
773 781Right-handed alpha
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There are 7 sheets in PDB entry 7PUG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 7first strand
Strand 2
A
154 157anti-parallel
Strand 3
A
14 19anti-parallel
Strand 4
A
22 23anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 58first strand
Strand 2
A
26 27parallel
Strand 3
A
65 71parallel
Strand 4
A
112 118parallel
Strand 5
A
98 104anti-parallel
Strand 6
A
160 161anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 242first strand
Strand 2
A
214 216parallel
Strand 3
A
170 174parallel
Strand 4
A
441 445parallel
Strand 5
A
400 405parallel
Strand 6
A
374 378parallel
Strand 7
A
351 354parallel
Strand 8
A
294 295parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
676 678first strand
Strand 2
A
711 717anti-parallel
Strand 3
A
798 805anti-parallel
Strand 4
A
744 749anti-parallel
Strand 5
A
754 758anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
676 678first strand
Strand 2
A
711 717anti-parallel
Strand 3
A
658 661parallel
Strand 4
A
834 836anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
666 670first strand
Strand 2
A
812 818anti-parallel
Strand 3
A
724 732anti-parallel
Strand 4
A
782 790anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
684 689first strand
Strand 2
A
696 701anti-parallel
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