Analysis of interatomic Contacts of Structural Units in PDB entry:
7PUK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PUK entry

There are 2 chains in PDB entry 7PUK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 61GLU 485
C
 GLU 61ASN 482
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 7PUK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
71 73Right-handed 310
Helix 2
AA2
A
90 94Right-handed 310
Helix 3
AA3
A
111 125Right-handed alpha
Helix 4
AA4
A
125 133Right-handed alpha
Helix 5
AA5
A
143 148Right-handed alpha
Helix 6
AA6
A
157 173Right-handed alpha
Helix 7
AA7
A
174 177Right-handed 310
Helix 8
AA8
A
190 205Right-handed alpha
Helix 9
AA9
A
209 213Right-handed 310
Helix 10
AB1
A
227 232Right-handed alpha
Helix 11
AB2
A
233 237Right-handed 310
Helix 12
AB3
A
248 259Right-handed alpha
Helix 13
AB4
A
260 263Right-handed 310
Helix 14
AB5
A
264 266Right-handed 310
Helix 15
AB6
A
289 292Right-handed 310
Helix 16
AB7
A
293 305Right-handed alpha
Helix 17
AB8
A
315 318Right-handed 310
Helix 18
AB9
A
323 328Right-handed alpha
Helix 19
AC1
A
335 347Right-handed alpha
Helix 20
AC2
A
349 365Right-handed alpha
Helix 21
AC3
A
370 383Right-handed alpha
Helix 22
AC4
A
386 396Right-handed alpha
Helix 23
AC5
A
408 416Right-handed alpha
Helix 24
AC6
A
420 436Right-handed alpha
Helix 25
AC7
A
437 440Right-handed 310
Helix 26
AC8
A
441 460Right-handed alpha
Helix 27
AC9
A
465 482Right-handed alpha
Helix 28
AD1
C
71 73Right-handed 310
Helix 29
AD2
C
90 94Right-handed 310
Helix 30
AD3
C
111 125Right-handed alpha
Helix 31
AD4
C
125 133Right-handed alpha
Helix 32
AD5
C
143 147Right-handed alpha
Helix 33
AD6
C
157 173Right-handed alpha
Helix 34
AD7
C
174 177Right-handed 310
Helix 35
AD8
C
190 205Right-handed alpha
Helix 36
AD9
C
209 213Right-handed 310
Helix 37
AE1
C
227 232Right-handed alpha
Helix 38
AE2
C
233 237Right-handed 310
Helix 39
AE3
C
248 260Right-handed alpha
Helix 40
AE4
C
264 266Right-handed 310
Helix 41
AE5
C
289 292Right-handed 310
Helix 42
AE6
C
293 305Right-handed alpha
Helix 43
AE7
C
315 318Right-handed 310
Helix 44
AE8
C
325 329Right-handed 310
Helix 45
AE9
C
335 346Right-handed alpha
Helix 46
AF1
C
349 365Right-handed alpha
Helix 47
AF2
C
370 384Right-handed alpha
Helix 48
AF3
C
386 396Right-handed alpha
Helix 49
AF4
C
408 417Right-handed alpha
Helix 50
AF5
C
420 436Right-handed alpha
Helix 51
AF6
C
441 460Right-handed alpha
Helix 52
AF7
C
465 481Right-handed alpha
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There are 2 sheets in PDB entry 7PUK. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 69first strand
Strand 2
A
100 104parallel
Strand 3
A
136 142parallel
Strand 4
A
180 184parallel
Strand 5
A
218 222parallel
Strand 6
A
239 243parallel
Strand 7
A
268 273parallel
Strand 8
A
309 313parallel
Strand 9
A
63 69parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
63 69first strand
Strand 2
C
100 104parallel
Strand 3
C
136 142parallel
Strand 4
C
180 185parallel
Strand 5
C
218 222parallel
Strand 6
C
240 243parallel
Strand 7
C
268 273parallel
Strand 8
C
309 313parallel
Strand 9
C
63 69parallel
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