Analysis of interatomic Contacts of Structural Units in PDB entry:
7PUY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PUY entry

There are 6 chains in PDB entry 7PUY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
a
 GLY 260HIS 448
b
 GLY 260HIS 448
c
 GLY 260HIS 448
A
 GLY 2LEU 259
B
 GLY 2LEU 259
C
 GLY 2LEU 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 7PUY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
a
294 300Right-handed alpha
Helix 2
AA2
a
301 303Right-handed 310
Helix 3
AA3
a
308 325Right-handed alpha
Helix 4
AA4
a
333 345Right-handed alpha
Helix 5
AA5
a
348 360Right-handed alpha
Helix 6
AA6
a
399 426Right-handed alpha
Helix 7
AA7
a
427 448Right-handed alpha
Helix 8
AA8
b
294 300Right-handed alpha
Helix 9
AA9
b
301 303Right-handed 310
Helix 10
AB1
b
308 325Right-handed alpha
Helix 11
AB2
b
333 345Right-handed alpha
Helix 12
AB3
b
348 360Right-handed alpha
Helix 13
AB4
b
399 426Right-handed alpha
Helix 14
AB5
b
427 448Right-handed alpha
Helix 15
AB6
c
294 300Right-handed alpha
Helix 16
AB7
c
301 303Right-handed 310
Helix 17
AB8
c
308 325Right-handed alpha
Helix 18
AB9
c
333 345Right-handed alpha
Helix 19
AC1
c
348 360Right-handed alpha
Helix 20
AC2
c
399 426Right-handed alpha
Helix 21
AC3
c
427 448Right-handed alpha
Helix 22
AC4
A
3 11Right-handed alpha
Helix 23
AC5
A
14 35Right-handed alpha
Helix 24
AC6
A
74 79Right-handed 310
Helix 25
AC7
A
119 126Right-handed alpha
Helix 26
AC8
A
130 143Right-handed alpha
Helix 27
AC9
A
157 161Right-handed 310
Helix 28
AD1
A
182 195Right-handed alpha
Helix 29
AD2
A
238 248Right-handed alpha
Helix 30
AD3
B
3 11Right-handed alpha
Helix 31
AD4
B
14 35Right-handed alpha
Helix 32
AD5
B
74 79Right-handed 310
Helix 33
AD6
B
119 126Right-handed alpha
Helix 34
AD7
B
130 143Right-handed alpha
Helix 35
AD8
B
157 161Right-handed 310
Helix 36
AD9
B
182 195Right-handed alpha
Helix 37
AE1
B
238 248Right-handed alpha
Helix 38
AE2
C
3 11Right-handed alpha
Helix 39
AE3
C
14 35Right-handed alpha
Helix 40
AE4
C
74 79Right-handed 310
Helix 41
AE5
C
119 126Right-handed alpha
Helix 42
AE6
C
130 143Right-handed alpha
Helix 43
AE7
C
157 161Right-handed 310
Helix 44
AE8
C
182 195Right-handed alpha
Helix 45
AE9
C
238 248Right-handed alpha
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There are 9 sheets in PDB entry 7PUY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
a
279 280first strand
Strand 2
a
291 292anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
a
392 393first strand
Strand 2
a
384 389anti-parallel
Strand 3
a
363 374anti-parallel
Strand 4
A
66 72anti-parallel
Strand 5
A
61 62anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
b
279 280first strand
Strand 2
b
291 292anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
b
392 393first strand
Strand 2
b
384 389anti-parallel
Strand 3
b
363 374anti-parallel
Strand 4
B
66 72anti-parallel
Strand 5
B
61 62anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
279 280first strand
Strand 2
c
291 292anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
c
392 393first strand
Strand 2
c
384 389anti-parallel
Strand 3
c
363 374anti-parallel
Strand 4
C
66 72anti-parallel
Strand 5
C
61 62anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 87first strand
Strand 2
A
92 97anti-parallel
Strand 3
A
101 108anti-parallel
Strand 4
A
219 225anti-parallel
Strand 5
A
163 167anti-parallel
Strand 6
A
154 156anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 87first strand
Strand 2
B
92 97anti-parallel
Strand 3
B
101 108anti-parallel
Strand 4
B
219 225anti-parallel
Strand 5
B
163 167anti-parallel
Strand 6
B
154 156anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
84 87first strand
Strand 2
C
92 97anti-parallel
Strand 3
C
101 108anti-parallel
Strand 4
C
219 225anti-parallel
Strand 5
C
163 167anti-parallel
Strand 6
C
154 156anti-parallel
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