Analysis of interatomic Contacts of Structural Units in PDB entry:
7PV2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7PV2 entry

There are 12 chains in PDB entry 7PV2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 8	LYS 284
B	TYR 8	LYS 284
C	TYR 8	LYS 284
D	TYR 8	LYS 284
E	TYR 8	LYS 284
F	TYR 8	LYS 284
G	TYR 8	LYS 284
H	TYR 8	LYS 284
I	TYR 8	LYS 284
J	TYR 8	LYS 284
K	TYR 8	LYS 284
L	TYR 8	LYS 284

There are 84 helices in PDB entry 7PV2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	16	Right-handed alpha
Helix 2	AA2	A	18	36	Right-handed alpha
Helix 3	AA3	A	48	60	Right-handed alpha
Helix 4	AA4	A	132	155	Right-handed alpha
Helix 5	AA5	A	169	177	Right-handed alpha
Helix 6	AA6	A	211	228	Right-handed alpha
Helix 7	AA7	A	256	274	Right-handed alpha
Helix 8	AA8	B	10	16	Right-handed alpha
Helix 9	AA9	B	18	36	Right-handed alpha
Helix 10	AB1	B	48	60	Right-handed alpha
Helix 11	AB2	B	132	155	Right-handed alpha
Helix 12	AB3	B	169	177	Right-handed alpha
Helix 13	AB4	B	211	228	Right-handed alpha
Helix 14	AB5	B	256	274	Right-handed alpha
Helix 15	AB6	C	10	16	Right-handed alpha
Helix 16	AB7	C	18	36	Right-handed alpha
Helix 17	AB8	C	48	60	Right-handed alpha
Helix 18	AB9	C	132	155	Right-handed alpha
Helix 19	AC1	C	169	177	Right-handed alpha
Helix 20	AC2	C	211	228	Right-handed alpha
Helix 21	AC3	C	256	274	Right-handed alpha
Helix 22	AC4	D	10	16	Right-handed alpha
Helix 23	AC5	D	18	36	Right-handed alpha
Helix 24	AC6	D	48	60	Right-handed alpha
Helix 25	AC7	D	132	155	Right-handed alpha
Helix 26	AC8	D	169	177	Right-handed alpha
Helix 27	AC9	D	211	228	Right-handed alpha
Helix 28	AD1	D	256	274	Right-handed alpha
Helix 29	AD2	E	10	16	Right-handed alpha
Helix 30	AD3	E	18	36	Right-handed alpha
Helix 31	AD4	E	48	60	Right-handed alpha
Helix 32	AD5	E	132	155	Right-handed alpha
Helix 33	AD6	E	169	177	Right-handed alpha
Helix 34	AD7	E	211	228	Right-handed alpha
Helix 35	AD8	E	256	274	Right-handed alpha
Helix 36	AD9	F	10	16	Right-handed alpha
Helix 37	AE1	F	18	36	Right-handed alpha
Helix 38	AE2	F	48	60	Right-handed alpha
Helix 39	AE3	F	132	155	Right-handed alpha
Helix 40	AE4	F	169	177	Right-handed alpha
Helix 41	AE5	F	211	228	Right-handed alpha
Helix 42	AE6	F	256	274	Right-handed alpha
Helix 43	AE7	G	10	16	Right-handed alpha
Helix 44	AE8	G	18	36	Right-handed alpha
Helix 45	AE9	G	48	60	Right-handed alpha
Helix 46	AF1	G	132	155	Right-handed alpha
Helix 47	AF2	G	169	177	Right-handed alpha
Helix 48	AF3	G	211	228	Right-handed alpha
Helix 49	AF4	G	256	274	Right-handed alpha
Helix 50	AF5	H	10	16	Right-handed alpha
Helix 51	AF6	H	18	36	Right-handed alpha
Helix 52	AF7	H	48	60	Right-handed alpha
Helix 53	AF8	H	132	155	Right-handed alpha
Helix 54	AF9	H	169	177	Right-handed alpha
Helix 55	AG1	H	211	228	Right-handed alpha
Helix 56	AG2	H	256	274	Right-handed alpha
Helix 57	AG3	I	10	16	Right-handed alpha
Helix 58	AG4	I	18	36	Right-handed alpha
Helix 59	AG5	I	48	60	Right-handed alpha
Helix 60	AG6	I	132	155	Right-handed alpha
Helix 61	AG7	I	169	177	Right-handed alpha
Helix 62	AG8	I	211	228	Right-handed alpha
Helix 63	AG9	I	256	274	Right-handed alpha
Helix 64	AH1	J	10	16	Right-handed alpha
Helix 65	AH2	J	18	36	Right-handed alpha
Helix 66	AH3	J	48	60	Right-handed alpha
Helix 67	AH4	J	132	155	Right-handed alpha
Helix 68	AH5	J	169	177	Right-handed alpha
Helix 69	AH6	J	211	228	Right-handed alpha
Helix 70	AH7	J	256	274	Right-handed alpha
Helix 71	AH8	K	10	16	Right-handed alpha
Helix 72	AH9	K	18	36	Right-handed alpha
Helix 73	AI1	K	48	60	Right-handed alpha
Helix 74	AI2	K	132	155	Right-handed alpha
Helix 75	AI3	K	169	177	Right-handed alpha
Helix 76	AI4	K	211	228	Right-handed alpha
Helix 77	AI5	K	256	274	Right-handed alpha
Helix 78	AI6	L	10	16	Right-handed alpha
Helix 79	AI7	L	18	36	Right-handed alpha
Helix 80	AI8	L	48	60	Right-handed alpha
Helix 81	AI9	L	132	155	Right-handed alpha
Helix 82	AJ1	L	169	177	Right-handed alpha
Helix 83	AJ2	L	211	228	Right-handed alpha
Helix 84	AJ3	L	256	274	Right-handed alpha

There are 48 sheets in PDB entry 7PV2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	41	first strand
Strand 2	A	279	282	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	74	75	first strand
Strand 2	A	61	64	anti-parallel
Strand 3	A	121	124	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	93	first strand
Strand 2	A	102	104	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	202	first strand
Strand 2	A	161	165	anti-parallel
Strand 3	B	186	189	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	189	first strand
Strand 2	L	161	165	parallel
Strand 3	L	199	202	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	41	first strand
Strand 2	B	279	282	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	74	75	first strand
Strand 2	B	61	64	anti-parallel
Strand 3	B	121	124	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	93	first strand
Strand 2	B	102	104	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	202	first strand
Strand 2	B	161	165	anti-parallel
Strand 3	C	186	189	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	38	41	first strand
Strand 2	C	279	282	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	75	first strand
Strand 2	C	61	64	anti-parallel
Strand 3	C	121	124	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	93	first strand
Strand 2	C	102	104	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	199	202	first strand
Strand 2	C	161	165	anti-parallel
Strand 3	D	186	189	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	38	41	first strand
Strand 2	D	279	282	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	74	75	first strand
Strand 2	D	61	64	anti-parallel
Strand 3	D	121	124	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	91	93	first strand
Strand 2	D	102	104	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	199	202	first strand
Strand 2	D	161	165	anti-parallel
Strand 3	E	186	189	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	38	41	first strand
Strand 2	E	279	282	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	74	75	first strand
Strand 2	E	61	64	anti-parallel
Strand 3	E	121	124	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	91	93	first strand
Strand 2	E	102	104	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	199	202	first strand
Strand 2	E	161	165	anti-parallel
Strand 3	F	186	189	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	38	41	first strand
Strand 2	F	279	282	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	74	75	first strand
Strand 2	F	61	64	anti-parallel
Strand 3	F	121	124	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	91	93	first strand
Strand 2	F	102	104	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	199	202	first strand
Strand 2	F	161	165	anti-parallel
Strand 3	G	186	189	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	38	41	first strand
Strand 2	G	279	282	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	74	75	first strand
Strand 2	G	61	64	anti-parallel
Strand 3	G	121	124	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	91	93	first strand
Strand 2	G	102	104	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	199	202	first strand
Strand 2	G	161	165	anti-parallel
Strand 3	H	186	189	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	38	41	first strand
Strand 2	H	279	282	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	74	75	first strand
Strand 2	H	61	64	anti-parallel
Strand 3	H	121	124	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	91	93	first strand
Strand 2	H	102	104	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	199	202	first strand
Strand 2	H	161	165	anti-parallel
Strand 3	I	186	189	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	38	41	first strand
Strand 2	I	279	282	anti-parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	74	75	first strand
Strand 2	I	61	64	anti-parallel
Strand 3	I	121	124	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	91	93	first strand
Strand 2	I	102	104	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	199	202	first strand
Strand 2	I	161	165	anti-parallel
Strand 3	J	186	189	parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	38	41	first strand
Strand 2	J	279	282	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	74	75	first strand
Strand 2	J	61	64	anti-parallel
Strand 3	J	121	124	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	91	93	first strand
Strand 2	J	102	104	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	199	202	first strand
Strand 2	J	161	165	anti-parallel
Strand 3	K	186	189	parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	38	41	first strand
Strand 2	K	279	282	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	74	75	first strand
Strand 2	K	61	64	anti-parallel
Strand 3	K	121	124	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	91	93	first strand
Strand 2	K	102	104	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	199	202	first strand
Strand 2	K	161	165	anti-parallel
Strand 3	L	186	189	parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	38	41	first strand
Strand 2	L	279	282	anti-parallel

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There are 3 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	74	75	first strand
Strand 2	L	61	64	anti-parallel
Strand 3	L	121	124	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	91	93	first strand
Strand 2	L	102	104	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7PV2

Analysis of interatomic Contacts of Structural Units in PDB entry:
7PV2