Analysis of interatomic Contacts of Structural Units in PDB entry:
7PW4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PW4 entry

There are 3 chains in PDB entry 7PW4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 UNK 147VAL 3661
B
 PRO 4TRP 559
C
 LYS 170LEU 519
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are140 helices in PDB entry 7PW4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
147 156Right-handed alpha
Helix 2
AA2
A
165 170Right-handed alpha
Helix 3
AA3
A
171 174Right-handed 310
Helix 4
AA4
A
192 198Right-handed alpha
Helix 5
AA5
A
208 219Right-handed alpha
Helix 6
AA6
A
230 244Right-handed alpha
Helix 7
AA7
A
249 265Right-handed alpha
Helix 8
AA8
A
270 285Right-handed alpha
Helix 9
AA9
A
291 303Right-handed alpha
Helix 10
AB1
A
313 323Right-handed alpha
Helix 11
AB2
A
335 347Right-handed alpha
Helix 12
AB3
A
356 376Right-handed alpha
Helix 13
AB4
A
394 411Right-handed alpha
Helix 14
AB5
A
428 444Right-handed alpha
Helix 15
AB6
A
449 467Right-handed alpha
Helix 16
AB7
A
475 487Right-handed alpha
Helix 17
AB8
A
493 511Right-handed alpha
Helix 18
AB9
A
516 522Right-handed alpha
Helix 19
AC1
A
529 534Right-handed alpha
Helix 20
AC2
A
538 554Right-handed alpha
Helix 21
AC3
A
557 583Right-handed alpha
Helix 22
AC4
A
589 593Right-handed 310
Helix 23
AC5
A
594 598Right-handed 310
Helix 24
AC6
A
603 618Right-handed alpha
Helix 25
AC7
A
618 623Right-handed alpha
Helix 26
AC8
A
637 644Right-handed alpha
Helix 27
AC9
A
647 651Right-handed 310
Helix 28
AD1
A
652 657Right-handed alpha
Helix 29
AD2
A
657 674Right-handed alpha
Helix 30
AD3
A
675 679Right-handed 310
Helix 31
AD4
A
699 703Right-handed alpha
Helix 32
AD5
A
706 720Right-handed alpha
Helix 33
AD6
A
724 743Right-handed alpha
Helix 34
AD7
A
748 753Right-handed 310
Helix 35
AD8
A
754 768Right-handed alpha
Helix 36
AD9
A
772 786Right-handed alpha
Helix 37
AE1
A
791 806Right-handed alpha
Helix 38
AE2
A
811 823Right-handed alpha
Helix 39
AE3
A
825 830Right-handed alpha
Helix 40
AE4
A
835 851Right-handed alpha
Helix 41
AE5
A
858 871Right-handed alpha
Helix 42
AE6
A
882 890Right-handed alpha
Helix 43
AE7
A
902 907Right-handed 310
Helix 44
AE8
A
908 927Right-handed alpha
Helix 45
AE9
A
935 956Right-handed alpha
Helix 46
AF1
A
969 999Right-handed alpha
Helix 47
AF2
A
1009 1019Right-handed alpha
Helix 48
AF3
A
1019 1041Right-handed alpha
Helix 49
AF4
A
1043 1058Right-handed alpha
Helix 50
AF5
A
1068 1083Right-handed alpha
Helix 51
AF6
A
1085 1097Right-handed alpha
Helix 52
AF7
A
1106 1115Right-handed alpha
Helix 53
AF8
A
1117 1134Right-handed alpha
Helix 54
AF9
A
1143 1151Right-handed alpha
Helix 55
AG1
A
1179 1197Right-handed alpha
Helix 56
AG2
A
1199 1218Right-handed alpha
Helix 57
AG3
A
1227 1240Right-handed alpha
Helix 58
AG4
A
1241 1250Right-handed alpha
Helix 59
AG5
A
1281 1305Right-handed alpha
Helix 60
AG6
A
1317 1332Right-handed alpha
Helix 61
AG7
A
1332 1341Right-handed alpha
Helix 62
AG8
A
1347 1367Right-handed alpha
Helix 63
AG9
A
1370 1374Right-handed 310
Helix 64
AH1
A
1378 1383Right-handed 310
Helix 65
AH2
A
1390 1407Right-handed alpha
Helix 66
AH3
A
1408 1410Right-handed 310
Helix 67
AH4
A
1417 1435Right-handed alpha
Helix 68
AH5
A
1437 1450Right-handed alpha
Helix 69
AH6
A
1458 1467Right-handed alpha
Helix 70
AH7
A
1479 1494Right-handed alpha
Helix 71
AH8
A
1496 1512Right-handed alpha
Helix 72
AH9
A
1520 1535Right-handed alpha
Helix 73
AI1
A
1539 1551Right-handed alpha
Helix 74
AI2
A
1559 1570Right-handed alpha
Helix 75
AI3
A
1588 1592Right-handed 310
Helix 76
AI4
A
1595 1612Right-handed alpha
Helix 77
AI5
A
1615 1637Right-handed alpha
Helix 78
AI6
A
1647 1656Right-handed alpha
Helix 79
AI7
A
1664 1674Right-handed alpha
Helix 80
AI8
A
1704 1717Right-handed alpha
Helix 81
AI9
A
1728 1740Right-handed alpha
Helix 82
AJ1
A
1742 1757Right-handed alpha
Helix 83
AJ2
A
1781 1799Right-handed alpha
Helix 84
AJ3
A
1803 1811Right-handed alpha
Helix 85
AJ4
A
1822 1829Right-handed alpha
Helix 86
AJ5
A
1835 1850Right-handed alpha
Helix 87
AJ6
A
1856 1865Right-handed alpha
Helix 88
AJ7
A
1924 1938Right-handed alpha
Helix 89
AJ8
A
1941 1958Right-handed alpha
Helix 90
AJ9
A
1963 1978Right-handed alpha
Helix 91
AK1
A
2007 2021Right-handed alpha
Helix 92
AK2
A
2036 2044Right-handed alpha
Helix 93
AK3
A
2046 2056Right-handed alpha
Helix 94
AK4
A
2069 2083Right-handed alpha
Helix 95
AK5
A
2160 2176Right-handed alpha
Helix 96
AK6
A
2177 2178Right-handed 310
Helix 97
AK7
A
2179 2184Right-handed 310
Helix 98
AK8
A
2214 2232Right-handed alpha
Helix 99
AK9
A
2248 2265Right-handed alpha
Helix 100
AL1
A
2276 2289Right-handed alpha
Helix 101
AL2
A
2296 2304Right-handed alpha
Helix 102
AL3
A
2306 2332Right-handed alpha
Helix 103
AL4
A
2361 2365Right-handed 310
Helix 104
AL5
A
2376 2382Right-handed alpha
Helix 105
AL6
A
2390 2406Right-handed alpha
Helix 106
AL7
A
2406 2419Right-handed alpha
Helix 107
AL8
A
3608 3622Right-handed alpha
Helix 108
AL9
A
3632 3644Right-handed alpha
Helix 109
AM1
A
3646 3651Right-handed alpha
Helix 110
AM2
A
3654 3658Right-handed 310
Helix 111
AM3
B
7 12Right-handed alpha
Helix 112
AM4
B
39 43Right-handed 310
Helix 113
AM5
B
62 73Right-handed alpha
Helix 114
AM6
B
158 172Right-handed alpha
Helix 115
AM7
B
182 204Right-handed alpha
Helix 116
AM8
B
221 245Right-handed alpha
Helix 117
AM9
B
252 258Right-handed alpha
Helix 118
AN1
B
296 315Right-handed alpha
Helix 119
AN2
B
346 360Right-handed alpha
Helix 120
AN3
B
409 423Right-handed alpha
Helix 121
AN4
B
444 458Right-handed alpha
Helix 122
AN5
B
477 483Right-handed alpha
Helix 123
AN6
B
489 509Right-handed alpha
Helix 124
AN7
B
524 539Right-handed alpha
Helix 125
AN8
B
543 558Right-handed alpha
Helix 126
AN9
C
194 198Right-handed 310
Helix 127
AO1
C
216 226Right-handed alpha
Helix 128
AO2
C
232 236Right-handed 310
Helix 129
AO3
C
242 247Right-handed alpha
Helix 130
AO4
C
275 284Right-handed alpha
Helix 131
AO5
C
297 315Right-handed alpha
Helix 132
AO6
C
329 340Right-handed alpha
Helix 133
AO7
C
375 379Right-handed 310
Helix 134
AO8
C
380 395Right-handed alpha
Helix 135
AO9
C
407 412Right-handed 310
Helix 136
AP1
C
418 422Right-handed 310
Helix 137
AP2
C
453 457Right-handed 310
Helix 138
AP3
C
465 479Right-handed alpha
Helix 139
AP4
C
491 508Right-handed alpha
Helix 140
AP5
C
510 518Right-handed alpha
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There are 5 sheets in PDB entry 7PW4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2123 2124first strand
Strand 2
A
2142 2143anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2129 2130first strand
Strand 2
A
2138 2140anti-parallel
Strand 3
A
2152 2154anti-parallel
Strand 4
A
2203 2206anti-parallel
Strand 5
A
2195 2197anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2212 2213first strand
Strand 2
A
2341 2343anti-parallel
Strand 3
A
2350 2352anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 6first strand
Strand 2
B
137 143anti-parallel
Strand 3
B
148 154anti-parallel
Strand 4
B
48 54parallel
Strand 5
B
209 213parallel
Strand 6
B
264 270parallel
Strand 7
B
336 339parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
181 184first strand
Strand 2
C
256 260anti-parallel
Strand 3
C
265 268anti-parallel
Strand 4
C
205 211parallel
Strand 5
C
317 322parallel
Strand 6
C
366 374parallel
Strand 7
C
428 432parallel
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