Analysis of interatomic Contacts of Structural Units in PDB entry:
7PWF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PWF entry

There are 46 chains in PDB entry 7PWF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
d
GLU 89LEU 136
T
SER 3ASP 132
N
MET 1THR 152
J
PRO 2ALA 167
D
VAL 12GLY 211
X
MET 1ALA 142
S
ASP 10GLY 142
Q
THR 24ARG 158
C
GLU 26THR 237
A
GLU 17LEU 210
B
ASN 18ASN 235
Y
GLU 3ALA 99
b
MET 44ARG 122
a
MET 1PRO 97
Z
ALA 26MET 84
V
ILE 7GLU 88
P
ASN 16GLY 129
R
GLY 2LYS 115
K
MET 1THR 94
I
GLY 2LYS 175
e
LEU 8ARG 64
H
ARG 7MET 190
n
MET 1SER 24
c
GLU 3ARG 62
O
GLU 20LEU 145
W
VAL 2TYR 130
E
ALA 2ALA 259
2
A 2 C 86
2
G 88 C 103
2
C 105 G 347
2
A 349 C 370
2
G 372 A 867
2
G 869 C 932
2
C 934 G 1010
2
U 1012 G 1034
2
C 1036 G 1260
2
A 1262 U 1313
2
G 1315 G 1324
2
C 1326 C 1389
2
G 1391 C 1425
2
G 1427 G 1433
2
C 1436 U 1452
L
ARG 20PHE 200
U
LYS 26GLU 121
G
SER 5MET 231
F
SER 22ARG 190
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are145 helices in PDB entry 7PWF. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
d
113 117Right-handed 310
Helix 2
AA2
d
121 132Right-handed alpha
Helix 3
AA3
T
8 20Right-handed alpha
Helix 4
AA4
T
29 33Right-handed 310
Helix 5
AA5
T
49 65Right-handed alpha
Helix 6
AA6
T
72 77Right-handed alpha
Helix 7
AA7
T
96 109Right-handed alpha
Helix 8
AA8
T
123 132Right-handed alpha
Helix 9
AA9
N
29 43Right-handed alpha
Helix 10
AB1
N
46 58Right-handed alpha
Helix 11
AB2
N
62 67Right-handed alpha
Helix 12
AB3
N
70 78Right-handed alpha
Helix 13
AB4
N
85 103Right-handed alpha
Helix 14
AB5
N
108 132Right-handed alpha
Helix 15
AB6
N
145 150Right-handed alpha
Helix 16
AB7
J
3 8Right-handed 310
Helix 17
AB8
J
22 36Right-handed alpha
Helix 18
AB9
J
41 63Right-handed alpha
Helix 19
AC1
J
68 85Right-handed alpha
Helix 20
AC2
J
94 98Right-handed 310
Helix 21
AC3
J
102 108Right-handed alpha
Helix 22
AC4
J
110 118Right-handed alpha
Helix 23
AC5
J
123 133Right-handed alpha
Helix 24
AC6
J
151 155Right-handed 310
Helix 25
AC7
D
13 36Right-handed alpha
Helix 26
AC8
D
60 65Right-handed alpha
Helix 27
AC9
D
66 68Right-handed 310
Helix 28
AD1
D
69 76Right-handed alpha
Helix 29
AD2
D
103 115Right-handed alpha
Helix 30
AD3
D
120 136Right-handed alpha
Helix 31
AD4
D
167 172Right-handed 310
Helix 32
AD5
X
9 21Right-handed alpha
Helix 33
AD6
X
24 32Right-handed alpha
Helix 34
AD7
X
33 39Right-handed alpha
Helix 35
AD8
X
89 94Right-handed 310
Helix 36
AD9
X
130 135Right-handed alpha
Helix 37
AE1
S
27 32Right-handed alpha
Helix 38
AE2
S
33 35Right-handed 310
Helix 39
AE3
S
39 47Right-handed alpha
Helix 40
AE4
S
48 51Right-handed 310
Helix 41
AE5
S
62 74Right-handed alpha
Helix 42
AE6
S
105 120Right-handed alpha
Helix 43
AE7
S
121 129Right-handed alpha
Helix 44
AE8
Q
55 57Right-handed 310
Helix 45
AE9
Q
67 73Right-handed alpha
Helix 46
AF1
Q
91 107Right-handed alpha
Helix 47
AF2
Q
114 126Right-handed alpha
Helix 48
AF3
Q
128 132Right-handed 310
Helix 49
AF4
C
31 39Right-handed alpha
Helix 50
AF5
C
44 51Right-handed alpha
Helix 51
AF6
C
57 65Right-handed alpha
Helix 52
AF7
C
114 129Right-handed alpha
Helix 53
AF8
C
175 185Right-handed alpha
Helix 54
AF9
C
200 214Right-handed alpha
Helix 55
AG1
C
215 217Right-handed 310
Helix 56
AG2
C
220 224Right-handed 310
Helix 57
AG3
C
230 234Right-handed 310
Helix 58
AG4
A
18 27Right-handed alpha
Helix 59
AG5
A
39 41Right-handed 310
Helix 60
AG6
A
55 71Right-handed alpha
Helix 61
AG7
A
75 77Right-handed 310
Helix 62
AG8
A
85 100Right-handed alpha
Helix 63
AG9
A
135 143Right-handed alpha
Helix 64
AH1
A
172 192Right-handed alpha
Helix 65
AH2
A
203 208Right-handed 310
Helix 66
AH3
B
20 23Right-handed 310
Helix 67
AH4
B
54 59Right-handed alpha
Helix 68
AH5
B
68 72Right-handed alpha
Helix 69
AH6
B
75 80Right-handed alpha
Helix 70
AH7
B
106 113Right-handed alpha
Helix 71
AH8
B
157 176Right-handed alpha
Helix 72
AH9
B
180 189Right-handed alpha
Helix 73
AI1
B
193 203Right-handed alpha
Helix 74
AI2
B
224 233Right-handed alpha
Helix 75
AI3
Y
35 40Right-handed alpha
Helix 76
AI4
Y
79 86Right-handed alpha
Helix 77
AI5
Y
89 94Right-handed alpha
Helix 78
AI6
b
52 58Right-handed alpha
Helix 79
AI7
a
46 50Right-handed 310
Helix 80
AI8
a
51 56Right-handed alpha
Helix 81
AI9
a
74 81Right-handed alpha
Helix 82
AJ1
a
90 94Right-handed 310
Helix 83
AJ2
Z
27 33Right-handed alpha
Helix 84
AJ3
Z
41 49Right-handed alpha
Helix 85
AJ4
Z
53 65Right-handed alpha
Helix 86
AJ5
V
64 69Right-handed alpha
Helix 87
AJ6
V
72 83Right-handed alpha
Helix 88
AJ7
P
21 25Right-handed 310
Helix 89
AJ8
P
38 46Right-handed alpha
Helix 90
AJ9
P
53 61Right-handed alpha
Helix 91
AK1
P
108 112Right-handed 310
Helix 92
AK2
P
115 119Right-handed 310
Helix 93
AK3
R
6 20Right-handed alpha
Helix 94
AK4
R
27 35Right-handed alpha
Helix 95
AK5
R
46 65Right-handed alpha
Helix 96
AK6
R
76 83Right-handed alpha
Helix 97
AK7
R
105 111Right-handed alpha
Helix 98
AK8
K
3 13Right-handed alpha
Helix 99
AK9
K
49 64Right-handed alpha
Helix 100
AL1
K
80 92Right-handed alpha
Helix 101
AL2
I
6 10Right-handed 310
Helix 102
AL3
I
25 29Right-handed 310
Helix 103
AL4
I
98 103Right-handed alpha
Helix 104
AL5
I
117 123Right-handed 310
Helix 105
AL6
I
129 138Right-handed alpha
Helix 106
AL7
I
148 153Right-handed alpha
Helix 107
AL8
I
162 172Right-handed alpha
Helix 108
AL9
e
12 17Right-handed alpha
Helix 109
AM1
e
32 44Right-handed alpha
Helix 110
AM2
H
21 28Right-handed alpha
Helix 111
AM3
H
66 68Right-handed 310
Helix 112
AM4
H
69 74Right-handed alpha
Helix 113
AM5
H
77 83Right-handed alpha
Helix 114
AM6
H
117 120Right-handed 310
Helix 115
AM7
H
121 133Right-handed alpha
Helix 116
AM8
H
166 168Right-handed 310
Helix 117
AM9
H
169 182Right-handed alpha
Helix 118
AN1
n
2 23Right-handed alpha
Helix 119
AN2
O
53 55Right-handed 310
Helix 120
AN3
O
58 62Right-handed 310
Helix 121
AN4
O
64 82Right-handed alpha
Helix 122
AN5
O
105 115Right-handed alpha
Helix 123
AN6
W
5 21Right-handed alpha
Helix 124
AN7
W
31 45Right-handed alpha
Helix 125
AN8
W
85 94Right-handed alpha
Helix 126
AN9
W
113 119Right-handed alpha
Helix 127
AO1
E
10 14Right-handed 310
Helix 128
AO2
E
15 19Right-handed 310
Helix 129
AO3
E
44 49Right-handed alpha
Helix 130
AO4
E
57 67Right-handed alpha
Helix 131
AO5
E
246 256Right-handed alpha
Helix 132
AO6
L
29 34Right-handed alpha
Helix 133
AO7
L
35 48Right-handed alpha
Helix 134
AO8
L
89 94Right-handed alpha
Helix 135
AO9
U
35 45Right-handed alpha
Helix 136
AP1
G
145 151Right-handed alpha
Helix 137
AP2
G
196 231Right-handed alpha
Helix 138
AP3
F
47 52Right-handed 310
Helix 139
AP4
F
53 63Right-handed alpha
Helix 140
AP5
F
71 81Right-handed alpha
Helix 141
AP6
F
82 87Right-handed alpha
Helix 142
AP7
F
93 105Right-handed alpha
Helix 143
AP8
F
128 149Right-handed alpha
Helix 144
AP9
F
154 167Right-handed alpha
Helix 145
AQ1
F
173 189Right-handed alpha
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There are 44 sheets in PDB entry 7PWF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
d
111 112first strand
Strand 2
d
119 120anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
d
134 135first strand
Strand 2
U
82 88anti-parallel
Strand 3
U
65 71anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
T
81 83first strand
Strand 2
T
91 93anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
T
113 115first strand
Strand 2
T
120 122anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
141 142first strand
Strand 2
J
136 138anti-parallel
Strand 3
J
158 160anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
40 44first strand
Strand 2
D
54 58anti-parallel
Strand 3
D
92 94parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
153 161first strand
Strand 2
D
139 147anti-parallel
Strand 3
D
188 195anti-parallel
Strand 4
D
174 181anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
X
128 129first strand
Strand 2
X
120 125anti-parallel
Strand 3
X
99 104anti-parallel
Strand 4
X
46 58anti-parallel
Strand 5
X
66 74anti-parallel
Strand 6
X
80 84anti-parallel
Strand 7
X
120 125parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
S
15 17first strand
Strand 2
S
20 22anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Q
25 30first strand
Strand 2
Q
35 41anti-parallel
Strand 3
Q
82 88anti-parallel
Strand 4
Q
48 49parallel
Strand 5
Q
52 53anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
71 82first strand
Strand 2
C
89 99anti-parallel
Strand 3
C
104 112anti-parallel
Strand 4
C
131 132anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
135 136first strand
Strand 2
C
147 148anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
152 156first strand
Strand 2
C
159 165anti-parallel
Strand 3
C
190 195anti-parallel
Strand 4
C
172 173parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
43 46first strand
Strand 2
A
52 54anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
102 104first strand
Strand 2
A
79 82parallel
Strand 3
A
126 129parallel
Strand 4
A
149 153parallel
Strand 5
A
164 167parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
40 47first strand
Strand 2
B
25 31anti-parallel
Strand 3
B
95 105parallel
Strand 4
B
82 92anti-parallel
Strand 5
B
63 67anti-parallel
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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
40 47first strand
Strand 2
B
25 31anti-parallel
Strand 3
B
95 105parallel
Strand 4
B
211 219anti-parallel
Strand 5
B
134 142anti-parallel
Strand 6
B
120 128anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Y
5 14first strand
Strand 2
Y
19 27anti-parallel
Strand 3
Y
68 76anti-parallel
Strand 4
Y
55 62anti-parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
b
84 88first strand
Strand 2
b
73 77anti-parallel
Strand 3
b
118 119anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
b
105 106first strand
Strand 2
b
113 114anti-parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
a
20 22first strand
Strand 2
a
29 31anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
a
36 43first strand
Strand 2
a
66 73anti-parallel
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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Z
39 40first strand
Strand 2
Z
79 82anti-parallel
Strand 3
Z
68 72anti-parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
V
40 44first strand
Strand 2
V
59 63anti-parallel
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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
P
76 78first strand
Strand 2
P
93 97parallel
Strand 3
P
102 106anti-parallel
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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
23 24first strand
Strand 2
K
74 79anti-parallel
Strand 3
K
66 71anti-parallel
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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
52 58first strand
Strand 2
I
61 68anti-parallel
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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
72 77first strand
Strand 2
I
82 93anti-parallel
Strand 3
I
111 115anti-parallel
Strand 4
I
140 145anti-parallel
Strand 5
I
157 159anti-parallel
Strand 6
I
72 77parallel
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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
47 49first strand
Strand 2
H
63 65anti-parallel
Strand 3
H
95 97parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
107 109first strand
Strand 2
H
112 114anti-parallel
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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
185 189first strand
Strand 2
H
153 158parallel
Strand 3
H
141 146anti-parallel
Strand 4
W
50 53anti-parallel
Strand 5
W
60 64anti-parallel
Strand 6
W
24 27anti-parallel
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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
c
38 41first strand
Strand 2
c
20 27anti-parallel
Strand 3
c
5 17anti-parallel
Strand 4
c
50 53anti-parallel
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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
O
46 51first strand
Strand 2
O
34 39anti-parallel
Strand 3
O
22 29anti-parallel
Strand 4
O
86 92parallel
Strand 5
O
119 125parallel
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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
W
71 74first strand
Strand 2
W
123 130anti-parallel
Strand 3
W
80 81anti-parallel
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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
W
71 74first strand
Strand 2
W
123 130anti-parallel
Strand 3
W
101 106anti-parallel
Strand 4
W
109 112anti-parallel
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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
42 43first strand
Strand 2
E
83 84anti-parallel
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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
75 76first strand
Strand 2
E
71 72anti-parallel
Strand 3
E
89 92anti-parallel
Strand 4
E
97 103anti-parallel
Strand 5
E
109 113anti-parallel
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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
146 148first strand
Strand 2
E
137 141anti-parallel
Strand 3
E
121 131anti-parallel
Strand 4
E
159 163anti-parallel
Strand 5
E
169 173anti-parallel
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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
217 221first strand
Strand 2
E
207 211anti-parallel
Strand 3
E
192 199anti-parallel
Strand 4
E
180 183anti-parallel
Strand 5
E
225 227anti-parallel
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There are 6 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
114 121first strand
Strand 2
L
127 138anti-parallel
Strand 3
L
143 154anti-parallel
Strand 4
L
179 187parallel
Strand 5
L
166 171anti-parallel
Strand 6
L
114 121anti-parallel
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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
U
90 96first strand
Strand 2
U
27 33anti-parallel
Strand 3
U
117 119anti-parallel
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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
18 23first strand
Strand 2
G
8 13anti-parallel
Strand 3
G
114 118parallel
Strand 4
G
57 60anti-parallel
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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
79 83first strand
Strand 2
G
99 103anti-parallel
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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
109 111first strand
Strand 2
F
124 126anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il