Analysis of interatomic Contacts of Structural Units in PDB entry:
7PWY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7PWY entry

There are 4 chains in PDB entry 7PWY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 2	PHE 335
B	LYS 2	PHE 335
C	LYS 2	GLU 331
D	LYS 2	LYS 333

There are 77 helices in PDB entry 7PWY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	16	22	Right-handed alpha
Helix 2	AA2	A	52	54	Right-handed 310
Helix 3	AA3	A	55	67	Right-handed alpha
Helix 4	AA4	A	76	80	Right-handed 310
Helix 5	AA5	A	85	107	Right-handed alpha
Helix 6	AA6	A	121	135	Right-handed alpha
Helix 7	AA7	A	154	156	Right-handed 310
Helix 8	AA8	A	157	168	Right-handed alpha
Helix 9	AA9	A	181	186	Right-handed 310
Helix 10	AB1	A	188	193	Right-handed alpha
Helix 11	AB2	A	193	209	Right-handed alpha
Helix 12	AB3	A	210	215	Right-handed alpha
Helix 13	AB4	A	224	227	Right-handed 310
Helix 14	AB5	A	228	243	Right-handed alpha
Helix 15	AB6	A	243	248	Right-handed alpha
Helix 16	AB7	A	254	259	Right-handed 310
Helix 17	AB8	A	270	281	Right-handed alpha
Helix 18	AB9	A	302	307	Right-handed alpha
Helix 19	AC1	A	312	321	Right-handed alpha
Helix 20	AC2	A	321	329	Right-handed alpha
Helix 21	AC3	B	16	22	Right-handed alpha
Helix 22	AC4	B	52	54	Right-handed 310
Helix 23	AC5	B	55	67	Right-handed alpha
Helix 24	AC6	B	76	80	Right-handed 310
Helix 25	AC7	B	85	107	Right-handed alpha
Helix 26	AC8	B	121	135	Right-handed alpha
Helix 27	AC9	B	154	156	Right-handed 310
Helix 28	AD1	B	157	168	Right-handed alpha
Helix 29	AD2	B	181	185	Right-handed 310
Helix 30	AD3	B	188	193	Right-handed alpha
Helix 31	AD4	B	193	209	Right-handed alpha
Helix 32	AD5	B	210	215	Right-handed alpha
Helix 33	AD6	B	224	227	Right-handed 310
Helix 34	AD7	B	228	243	Right-handed alpha
Helix 35	AD8	B	243	248	Right-handed alpha
Helix 36	AD9	B	254	259	Right-handed 310
Helix 37	AE1	B	270	282	Right-handed alpha
Helix 38	AE2	B	302	308	Right-handed alpha
Helix 39	AE3	B	312	321	Right-handed alpha
Helix 40	AE4	B	321	329	Right-handed alpha
Helix 41	AE5	C	16	22	Right-handed alpha
Helix 42	AE6	C	50	54	Right-handed 310
Helix 43	AE7	C	55	67	Right-handed alpha
Helix 44	AE8	C	77	80	Right-handed 310
Helix 45	AE9	C	85	107	Right-handed alpha
Helix 46	AF1	C	121	135	Right-handed alpha
Helix 47	AF2	C	154	156	Right-handed 310
Helix 48	AF3	C	157	168	Right-handed alpha
Helix 49	AF4	C	188	193	Right-handed alpha
Helix 50	AF5	C	193	209	Right-handed alpha
Helix 51	AF6	C	210	215	Right-handed alpha
Helix 52	AF7	C	224	227	Right-handed 310
Helix 53	AF8	C	228	241	Right-handed alpha
Helix 54	AF9	C	254	259	Right-handed 310
Helix 55	AG1	C	270	281	Right-handed alpha
Helix 56	AG2	C	302	308	Right-handed alpha
Helix 57	AG3	C	312	321	Right-handed alpha
Helix 58	AG4	C	321	329	Right-handed alpha
Helix 59	AG5	D	16	22	Right-handed alpha
Helix 60	AG6	D	52	54	Right-handed 310
Helix 61	AG7	D	55	67	Right-handed alpha
Helix 62	AG8	D	77	80	Right-handed 310
Helix 63	AG9	D	85	107	Right-handed alpha
Helix 64	AH1	D	121	135	Right-handed alpha
Helix 65	AH2	D	154	156	Right-handed 310
Helix 66	AH3	D	157	167	Right-handed alpha
Helix 67	AH4	D	181	185	Right-handed 310
Helix 68	AH5	D	188	193	Right-handed alpha
Helix 69	AH6	D	193	209	Right-handed alpha
Helix 70	AH7	D	210	215	Right-handed alpha
Helix 71	AH8	D	224	227	Right-handed 310
Helix 72	AH9	D	228	241	Right-handed alpha
Helix 73	AI1	D	254	259	Right-handed 310
Helix 74	AI2	D	270	281	Right-handed alpha
Helix 75	AI3	D	302	307	Right-handed alpha
Helix 76	AI4	D	312	321	Right-handed alpha
Helix 77	AI5	D	321	329	Right-handed alpha

There are 11 sheets in PDB entry 7PWY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	8	first strand
Strand 2	A	70	74	parallel
Strand 3	A	111	116	parallel
Strand 4	A	140	144	parallel
Strand 5	A	170	174	parallel
Strand 6	A	220	222	parallel
Strand 7	A	263	265	parallel
Strand 8	A	286	287	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	33	first strand
Strand 2	A	36	41	anti-parallel
Strand 3	A	44	50	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	147	first strand
Strand 2	A	150	151	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	8	first strand
Strand 2	B	70	74	parallel
Strand 3	B	111	116	parallel
Strand 4	B	140	144	parallel
Strand 5	B	170	174	parallel
Strand 6	B	220	222	parallel
Strand 7	B	263	265	parallel
Strand 8	B	286	287	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	30	first strand
Strand 2	B	36	41	anti-parallel
Strand 3	B	44	50	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	147	first strand
Strand 2	B	150	151	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	9	first strand
Strand 2	C	70	75	parallel
Strand 3	C	111	115	parallel
Strand 4	C	140	144	parallel
Strand 5	C	170	174	parallel
Strand 6	C	220	222	parallel
Strand 7	C	263	265	parallel
Strand 8	C	286	287	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	29	first strand
Strand 2	C	38	40	anti-parallel
Strand 3	C	47	48	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	9	first strand
Strand 2	D	70	75	parallel
Strand 3	D	111	115	parallel
Strand 4	D	140	144	parallel
Strand 5	D	170	174	parallel
Strand 6	D	219	222	parallel
Strand 7	D	263	265	parallel
Strand 8	D	286	287	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	27	31	first strand
Strand 2	D	36	41	anti-parallel
Strand 3	D	44	50	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	146	147	first strand
Strand 2	D	150	151	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7PWY

Analysis of interatomic Contacts of Structural Units in PDB entry:
7PWY