Analysis of interatomic Contacts of Structural Units in PDB entry:
7PX8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7PX8 entry

There are 4 chains in PDB entry 7PX8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 9	SER 732
B	GLU 9	SER 732
C	GLU 9	SER 732
D	GLU 9	SER 732

There are 53 helices in PDB entry 7PX8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	21	Right-handed alpha
Helix 2	AA2	A	135	139	Right-handed alpha
Helix 3	AA3	A	253	255	Right-handed 310
Helix 4	AA4	A	519	527	Right-handed alpha
Helix 5	AA5	A	544	549	Right-handed alpha
Helix 6	AA6	A	558	571	Right-handed alpha
Helix 7	AA7	A	587	600	Right-handed alpha
Helix 8	AA8	A	615	620	Right-handed alpha
Helix 9	AA9	A	626	634	Right-handed alpha
Helix 10	AB1	A	644	655	Right-handed alpha
Helix 11	AB2	A	680	693	Right-handed alpha
Helix 12	AB3	A	711	731	Right-handed alpha
Helix 13	AB4	B	10	21	Right-handed alpha
Helix 14	AB5	B	135	139	Right-handed alpha
Helix 15	AB6	B	253	255	Right-handed 310
Helix 16	AB7	B	519	527	Right-handed alpha
Helix 17	AB8	B	544	551	Right-handed alpha
Helix 18	AB9	B	558	571	Right-handed alpha
Helix 19	AC1	B	587	600	Right-handed alpha
Helix 20	AC2	B	615	622	Right-handed alpha
Helix 21	AC3	B	626	634	Right-handed alpha
Helix 22	AC4	B	644	655	Right-handed alpha
Helix 23	AC5	B	659	663	Right-handed 310
Helix 24	AC6	B	680	693	Right-handed alpha
Helix 25	AC7	B	711	730	Right-handed alpha
Helix 26	AC8	C	10	21	Right-handed alpha
Helix 27	AC9	C	135	139	Right-handed alpha
Helix 28	AD1	C	253	255	Right-handed 310
Helix 29	AD2	C	471	475	Right-handed 310
Helix 30	AD3	C	519	527	Right-handed alpha
Helix 31	AD4	C	544	551	Right-handed alpha
Helix 32	AD5	C	557	572	Right-handed alpha
Helix 33	AD6	C	588	600	Right-handed alpha
Helix 34	AD7	C	615	620	Right-handed alpha
Helix 35	AD8	C	626	634	Right-handed alpha
Helix 36	AD9	C	644	654	Right-handed alpha
Helix 37	AE1	C	655	663	Right-handed 310
Helix 38	AE2	C	680	693	Right-handed alpha
Helix 39	AE3	C	711	731	Right-handed alpha
Helix 40	AE4	D	10	21	Right-handed alpha
Helix 41	AE5	D	135	139	Right-handed alpha
Helix 42	AE6	D	253	255	Right-handed 310
Helix 43	AE7	D	471	475	Right-handed 310
Helix 44	AE8	D	519	527	Right-handed alpha
Helix 45	AE9	D	544	551	Right-handed alpha
Helix 46	AF1	D	557	573	Right-handed alpha
Helix 47	AF2	D	588	600	Right-handed alpha
Helix 48	AF3	D	615	622	Right-handed alpha
Helix 49	AF4	D	626	634	Right-handed alpha
Helix 50	AF5	D	644	655	Right-handed alpha
Helix 51	AF6	D	656	663	Right-handed 310
Helix 52	AF7	D	680	693	Right-handed alpha
Helix 53	AF8	D	711	730	Right-handed alpha

There are 42 sheets in PDB entry 7PX8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	25	31	first strand
Strand 2	A	42	54	anti-parallel
Strand 3	A	59	71	anti-parallel
Strand 4	A	76	81	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	36	first strand
Strand 2	A	42	54	anti-parallel
Strand 3	A	59	71	anti-parallel
Strand 4	A	86	88	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	96	first strand
Strand 2	A	102	108	anti-parallel
Strand 3	A	119	125	anti-parallel
Strand 4	A	128	134	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	153	155	first strand
Strand 2	A	161	167	anti-parallel
Strand 3	A	222	228	anti-parallel
Strand 4	A	234	236	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	173	174	first strand
Strand 2	A	201	202	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	244	251	first strand
Strand 2	A	257	264	anti-parallel
Strand 3	A	280	286	anti-parallel
Strand 4	A	293	294	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	301	307	first strand
Strand 2	A	313	319	anti-parallel
Strand 3	A	330	335	anti-parallel
Strand 4	A	340	345	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	375	382	first strand
Strand 2	A	385	392	anti-parallel
Strand 3	A	398	400	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	409	416	first strand
Strand 2	A	419	425	anti-parallel
Strand 3	A	433	437	anti-parallel
Strand 4	A	449	453	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	461	468	first strand
Strand 2	A	484	491	anti-parallel
Strand 3	A	531	536	anti-parallel
Strand 4	A	502	506	parallel
Strand 5	A	581	584	parallel
Strand 6	A	606	610	parallel
Strand 7	A	667	672	parallel
Strand 8	A	697	702	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	31	first strand
Strand 2	B	42	54	anti-parallel
Strand 3	B	59	71	anti-parallel
Strand 4	B	76	81	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	36	first strand
Strand 2	B	42	54	anti-parallel
Strand 3	B	59	71	anti-parallel
Strand 4	B	86	88	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	96	first strand
Strand 2	B	102	108	anti-parallel
Strand 3	B	119	125	anti-parallel
Strand 4	B	128	134	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	153	155	first strand
Strand 2	B	161	167	anti-parallel
Strand 3	B	222	228	anti-parallel
Strand 4	B	234	236	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	173	174	first strand
Strand 2	B	201	202	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	244	251	first strand
Strand 2	B	257	264	anti-parallel
Strand 3	B	280	286	anti-parallel
Strand 4	B	293	294	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	301	307	first strand
Strand 2	B	313	319	anti-parallel
Strand 3	B	330	335	anti-parallel
Strand 4	B	340	343	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	375	381	first strand
Strand 2	B	386	392	anti-parallel
Strand 3	B	398	400	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	409	416	first strand
Strand 2	B	419	425	anti-parallel
Strand 3	B	433	437	anti-parallel
Strand 4	B	449	453	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	461	468	first strand
Strand 2	B	484	491	anti-parallel
Strand 3	B	531	536	anti-parallel
Strand 4	B	500	506	parallel
Strand 5	B	576	583	parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	585	586	first strand
Strand 2	B	607	610	parallel
Strand 3	B	667	672	parallel
Strand 4	B	697	702	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	25	31	first strand
Strand 2	C	42	54	anti-parallel
Strand 3	C	59	71	anti-parallel
Strand 4	C	76	81	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	36	first strand
Strand 2	C	42	54	anti-parallel
Strand 3	C	59	71	anti-parallel
Strand 4	C	86	88	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	96	first strand
Strand 2	C	102	108	anti-parallel
Strand 3	C	119	125	anti-parallel
Strand 4	C	128	134	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	153	155	first strand
Strand 2	C	161	167	anti-parallel
Strand 3	C	222	228	anti-parallel
Strand 4	C	234	236	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	173	174	first strand
Strand 2	C	201	202	parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	244	246	first strand
Strand 2	C	257	264	anti-parallel
Strand 3	C	250	251	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	244	246	first strand
Strand 2	C	257	264	anti-parallel
Strand 3	C	280	286	anti-parallel
Strand 4	C	293	294	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	301	307	first strand
Strand 2	C	313	319	anti-parallel
Strand 3	C	330	335	anti-parallel
Strand 4	C	341	343	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	375	382	first strand
Strand 2	C	385	392	anti-parallel
Strand 3	C	398	400	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	409	416	first strand
Strand 2	C	419	425	anti-parallel
Strand 3	C	433	437	anti-parallel
Strand 4	C	450	453	anti-parallel

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There are 8 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	461	468	first strand
Strand 2	C	484	491	anti-parallel
Strand 3	C	531	536	anti-parallel
Strand 4	C	500	506	parallel
Strand 5	C	576	585	parallel
Strand 6	C	606	609	parallel
Strand 7	C	667	672	parallel
Strand 8	C	697	702	parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	25	31	first strand
Strand 2	D	42	54	anti-parallel
Strand 3	D	59	71	anti-parallel
Strand 4	D	76	81	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	36	first strand
Strand 2	D	42	54	anti-parallel
Strand 3	D	59	71	anti-parallel
Strand 4	D	86	88	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	91	96	first strand
Strand 2	D	102	108	anti-parallel
Strand 3	D	119	125	anti-parallel
Strand 4	D	128	134	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	153	155	first strand
Strand 2	D	161	167	anti-parallel
Strand 3	D	222	228	anti-parallel
Strand 4	D	234	236	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	173	174	first strand
Strand 2	D	201	202	parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	244	251	first strand
Strand 2	D	257	264	anti-parallel
Strand 3	D	280	286	anti-parallel
Strand 4	D	293	294	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	301	307	first strand
Strand 2	D	313	319	anti-parallel
Strand 3	D	330	335	anti-parallel
Strand 4	D	341	345	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	375	382	first strand
Strand 2	D	385	392	anti-parallel
Strand 3	D	398	400	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	409	416	first strand
Strand 2	D	419	425	anti-parallel
Strand 3	D	433	437	anti-parallel
Strand 4	D	449	453	anti-parallel

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There are 8 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	461	468	first strand
Strand 2	D	484	491	anti-parallel
Strand 3	D	531	536	anti-parallel
Strand 4	D	502	506	parallel
Strand 5	D	581	587	parallel
Strand 6	D	608	612	parallel
Strand 7	D	667	672	parallel
Strand 8	D	697	702	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7PX8

Analysis of interatomic Contacts of Structural Units in PDB entry:
7PX8