Analysis of interatomic Contacts of Structural Units in PDB entry:
7PY6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7PY6 entry

There are 10 chains in PDB entry 7PY6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
N
C 9 A 38
T
T 2 G 31
R
U 4 G 14
A
GLU 7LEU 234
B
SER 4LEU 234
C
VAL 2GLU 1342
D
GLU 16ARG 1373
E
ALA 2ARG 91
G
MET 1ARG 123
F
MET 1ALA 495
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are137 helices in PDB entry 7PY6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
35 50Right-handed alpha
Helix 2
AA2
A
77 87Right-handed alpha
Helix 3
AA3
A
113 115Right-handed 310
Helix 4
AA4
A
156 162Right-handed 310
Helix 5
AA5
A
212 229Right-handed alpha
Helix 6
AA6
B
34 50Right-handed alpha
Helix 7
AA7
B
77 86Right-handed alpha
Helix 8
AA8
B
113 115Right-handed 310
Helix 9
AA9
B
154 158Right-handed 310
Helix 10
AB1
B
212 228Right-handed alpha
Helix 11
AB2
C
5 10Right-handed 310
Helix 12
AB3
C
30 39Right-handed alpha
Helix 13
AB4
C
48 57Right-handed alpha
Helix 14
AB5
C
81 89Right-handed alpha
Helix 15
AB6
C
206 213Right-handed alpha
Helix 16
AB7
C
216 225Right-handed alpha
Helix 17
AB8
C
242 247Right-handed 310
Helix 18
AB9
C
270 280Right-handed alpha
Helix 19
AC1
C
288 293Right-handed alpha
Helix 20
AC2
C
318 328Right-handed alpha
Helix 21
AC3
C
345 354Right-handed alpha
Helix 22
AC4
C
358 371Right-handed alpha
Helix 23
AC5
C
377 389Right-handed alpha
Helix 24
AC6
C
398 409Right-handed alpha
Helix 25
AC7
C
421 438Right-handed alpha
Helix 26
AC8
C
447 449Right-handed 310
Helix 27
AC9
C
455 480Right-handed alpha
Helix 28
AD1
C
488 493Right-handed alpha
Helix 29
AD2
C
495 508Right-handed alpha
Helix 30
AD3
C
519 526Right-handed alpha
Helix 31
AD4
C
544 549Right-handed alpha
Helix 32
AD5
C
551 555Right-handed 310
Helix 33
AD6
C
565 569Right-handed 310
Helix 34
AD7
C
608 612Right-handed alpha
Helix 35
AD8
C
662 667Right-handed alpha
Helix 36
AD9
C
670 674Right-handed 310
Helix 37
AE1
C
675 688Right-handed alpha
Helix 38
AE2
C
704 712Right-handed alpha
Helix 39
AE3
C
820 825Right-handed alpha
Helix 40
AE4
C
858 863Right-handed alpha
Helix 41
AE5
C
896 904Right-handed alpha
Helix 42
AE6
C
942 981Right-handed alpha
Helix 43
AE7
C
993 997Right-handed 310
Helix 44
AE8
C
1005 1038Right-handed alpha
Helix 45
AE9
C
1081 1085Right-handed 310
Helix 46
AF1
C
1099 1103Right-handed 310
Helix 47
AF2
C
1109 1134Right-handed alpha
Helix 48
AF3
C
1137 1151Right-handed alpha
Helix 49
AF4
C
1165 1176Right-handed alpha
Helix 50
AF5
C
1177 1179Right-handed 310
Helix 51
AF6
C
1191 1202Right-handed alpha
Helix 52
AF7
C
1238 1242Right-handed 310
Helix 53
AF8
C
1271 1281Right-handed alpha
Helix 54
AF9
C
1283 1293Right-handed alpha
Helix 55
AG1
C
1297 1309Right-handed alpha
Helix 56
AG2
C
1320 1333Right-handed alpha
Helix 57
AG3
D
26 34Right-handed alpha
Helix 58
AG4
D
77 81Right-handed 310
Helix 59
AG5
D
94 100Right-handed 310
Helix 60
AG6
D
113 118Right-handed alpha
Helix 61
AG7
D
122 129Right-handed alpha
Helix 62
AG8
D
131 140Right-handed alpha
Helix 63
AG9
D
161 172Right-handed alpha
Helix 64
AH1
D
180 191Right-handed alpha
Helix 65
AH2
D
193 208Right-handed alpha
Helix 66
AH3
D
210 230Right-handed alpha
Helix 67
AH4
D
233 238Right-handed 310
Helix 68
AH5
D
246 250Right-handed 310
Helix 69
AH6
D
263 285Right-handed alpha
Helix 70
AH7
D
288 308Right-handed alpha
Helix 71
AH8
D
326 332Right-handed alpha
Helix 72
AH9
D
336 342Right-handed alpha
Helix 73
AI1
D
370 377Right-handed alpha
Helix 74
AI2
D
377 389Right-handed alpha
Helix 75
AI3
D
393 402Right-handed alpha
Helix 76
AI4
D
405 416Right-handed alpha
Helix 77
AI5
D
430 432Right-handed 310
Helix 78
AI6
D
450 455Right-handed alpha
Helix 79
AI7
D
473 484Right-handed alpha
Helix 80
AI8
D
505 515Right-handed alpha
Helix 81
AI9
D
529 540Right-handed alpha
Helix 82
AJ1
D
574 580Right-handed alpha
Helix 83
AJ2
D
588 592Right-handed 310
Helix 84
AJ3
D
597 612Right-handed alpha
Helix 85
AJ4
D
614 634Right-handed alpha
Helix 86
AJ5
D
640 644Right-handed 310
Helix 87
AJ6
D
649 670Right-handed alpha
Helix 88
AJ7
D
674 703Right-handed alpha
Helix 89
AJ8
D
720 728Right-handed alpha
Helix 90
AJ9
D
733 742Right-handed alpha
Helix 91
AK1
D
768 805Right-handed alpha
Helix 92
AK2
D
835 840Right-handed alpha
Helix 93
AK3
D
865 876Right-handed alpha
Helix 94
AK4
D
895 900Right-handed alpha
Helix 95
AK5
D
915 925Right-handed alpha
Helix 96
AK6
D
926 928Right-handed 310
Helix 97
AK7
D
1068 1073Right-handed alpha
Helix 98
AK8
D
1137 1147Right-handed alpha
Helix 99
AK9
D
1216 1224Right-handed alpha
Helix 100
AL1
D
1225 1243Right-handed alpha
Helix 101
AL2
D
1249 1259Right-handed alpha
Helix 102
AL3
D
1282 1295Right-handed alpha
Helix 103
AL4
D
1308 1315Right-handed alpha
Helix 104
AL5
D
1318 1324Right-handed alpha
Helix 105
AL6
D
1327 1339Right-handed alpha
Helix 106
AL7
D
1347 1354Right-handed alpha
Helix 107
AL8
D
1362 1373Right-handed alpha
Helix 108
AL9
E
6 13Right-handed alpha
Helix 109
AM1
E
17 33Right-handed alpha
Helix 110
AM2
E
45 55Right-handed alpha
Helix 111
AM3
E
60 90Right-handed alpha
Helix 112
AM4
G
18 34Right-handed alpha
Helix 113
AM5
G
76 85Right-handed alpha
Helix 114
AM6
G
104 119Right-handed alpha
Helix 115
AM7
F
4 10Right-handed alpha
Helix 116
AM8
F
19 39Right-handed alpha
Helix 117
AM9
F
80 84Right-handed 310
Helix 118
AN1
F
106 131Right-handed alpha
Helix 119
AN2
F
132 134Right-handed 310
Helix 120
AN3
F
155 157Right-handed 310
Helix 121
AN4
F
202 207Right-handed alpha
Helix 122
AN5
F
208 211Right-handed 310
Helix 123
AN6
F
281 286Right-handed alpha
Helix 124
AN7
F
310 312Right-handed 310
Helix 125
AN8
F
313 318Right-handed alpha
Helix 126
AN9
F
324 330Right-handed alpha
Helix 127
AO1
F
340 345Right-handed 310
Helix 128
AO2
F
346 358Right-handed alpha
Helix 129
AO3
F
359 361Right-handed 310
Helix 130
AO4
F
369 377Right-handed alpha
Helix 131
AO5
F
388 393Right-handed alpha
Helix 132
AO6
F
399 402Right-handed 310
Helix 133
AO7
F
403 408Right-handed alpha
Helix 134
AO8
F
417 421Right-handed 310
Helix 135
AO9
F
445 450Right-handed alpha
Helix 136
AP1
F
455 459Right-handed 310
Helix 137
AP2
F
479 491Right-handed alpha
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There are 51 sheets in PDB entry 7PY6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
13 17first strand
Strand 2
A
23 28anti-parallel
Strand 3
A
199 207anti-parallel
Strand 4
A
180 189anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
97 101first strand
Strand 2
A
143 147anti-parallel
Strand 3
A
56 60anti-parallel
Strand 4
A
171 172anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
90 92first strand
Strand 2
A
121 123anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
104 105first strand
Strand 2
A
139 140anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
110 111first strand
Strand 2
A
129 131anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
12 18first strand
Strand 2
B
24 29anti-parallel
Strand 3
B
199 207anti-parallel
Strand 4
B
180 182anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
12 18first strand
Strand 2
B
24 29anti-parallel
Strand 3
B
199 207anti-parallel
Strand 4
B
185 189anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
97 104first strand
Strand 2
B
140 149anti-parallel
Strand 3
B
53 61anti-parallel
Strand 4
B
171 172anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
90 91first strand
Strand 2
B
122 123anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
108 111first strand
Strand 2
B
129 133anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
13 14first strand
Strand 2
C
1182 1183parallel
Strand 3
C
700 701parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
59 60first strand
Strand 2
C
66 75anti-parallel
Strand 3
C
93 105anti-parallel
Strand 4
C
114 128anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
136 137first strand
Strand 2
C
142 145anti-parallel
Strand 3
C
512 514anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
451 454first strand
Strand 2
C
147 151anti-parallel
Strand 3
C
529 531parallel
Strand 4
C
572 574anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
154 158first strand
Strand 2
C
173 177anti-parallel
Strand 3
C
184 187anti-parallel
Strand 4
C
195 197anti-parallel
Strand 5
C
204 205anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
284 286first strand
Strand 2
C
238 240anti-parallel
Strand 3
C
228 231anti-parallel
Strand 4
C
332 335anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
256 257first strand
Strand 2
C
260 261anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
296 297first strand
Strand 2
C
315 316anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
301 302first strand
Strand 2
C
309 311anti-parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
580 581first strand
Strand 2
C
587 594anti-parallel
Strand 3
C
599 607anti-parallel
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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
580 581first strand
Strand 2
C
587 594anti-parallel
Strand 3
C
652 653anti-parallel
Strand 4
C
615 617parallel
Strand 5
C
633 638anti-parallel
Strand 6
C
641 646anti-parallel
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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
716 717first strand
Strand 2
C
782 785anti-parallel
Strand 3
C
768 769anti-parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
749 752first strand
Strand 2
C
731 736anti-parallel
Strand 3
C
722 727anti-parallel
Strand 4
C
776 777anti-parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
757 758first strand
Strand 2
C
764 765anti-parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
789 790first strand
Strand 2
C
793 794anti-parallel
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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1076 1080first strand
Strand 2
C
816 819parallel
Strand 3
C
1096 1098anti-parallel
Strand 4
C
798 804parallel
Strand 5
C
1225 1232anti-parallel
Strand 6
C
1209 1210anti-parallel
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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
830 838first strand
Strand 2
C
1048 1058anti-parallel
Strand 3
C
927 935anti-parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1087 1088first strand
Strand 2
C
1212 1213anti-parallel
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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1244 1246first strand
Strand 2
D
350 356anti-parallel
Strand 3
D
465 469anti-parallel
Strand 4
D
421 424anti-parallel
Strand 5
D
434 437anti-parallel
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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1244 1246first strand
Strand 2
D
350 356anti-parallel
Strand 3
D
447 448parallel
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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1335 1340first strand
Strand 2
D
19 24anti-parallel
Strand 3
D
1342 1343anti-parallel
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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
103 111first strand
Strand 2
D
239 244anti-parallel
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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
159 160first strand
Strand 2
D
144 146anti-parallel
Strand 3
D
178 179anti-parallel
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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
367 369first strand
Strand 2
D
440 442parallel
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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
526 527first strand
Strand 2
D
547 556parallel
Strand 3
D
564 573anti-parallel
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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
820 822first strand
Strand 2
D
880 882anti-parallel
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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
949 951first strand
Strand 2
D
1016 1019anti-parallel
Strand 3
D
1002 1003anti-parallel
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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
957 961first strand
Strand 2
D
980 985anti-parallel
Strand 3
D
991 997anti-parallel
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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
965 967first strand
Strand 2
D
973 975anti-parallel
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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1024 1028first strand
Strand 2
D
1120 1125anti-parallel
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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1034 1035first strand
Strand 2
D
1080 1081anti-parallel
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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1046 1049first strand
Strand 2
D
1058 1061anti-parallel
Strand 3
D
1105 1107anti-parallel
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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1077 1078first strand
Strand 2
D
1099 1100anti-parallel
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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1187 1190first strand
Strand 2
D
1173 1178anti-parallel
Strand 3
D
1161 1164anti-parallel
Strand 4
D
1203 1204anti-parallel
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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1279 1281first strand
Strand 2
D
1263 1268anti-parallel
Strand 3
D
1301 1304anti-parallel
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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
42 43first strand
Strand 2
G
68 73anti-parallel
Strand 3
G
8 13anti-parallel
Strand 4
G
91 92anti-parallel
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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
47 48first strand
Strand 2
G
61 62anti-parallel
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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
47 49first strand
Strand 2
F
56 58anti-parallel
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There are 5 strands in AF4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
141 142first strand
Strand 2
F
151 154anti-parallel
Strand 3
F
158 162anti-parallel
Strand 4
F
195 197parallel
Strand 5
F
183 186anti-parallel
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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
221 222first strand
Strand 2
F
239 240anti-parallel
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There are 3 strands in AF6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
226 228first strand
Strand 2
F
234 236anti-parallel
Strand 3
F
272 273parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il