Analysis of interatomic Contacts of Structural Units in PDB entry:
7PZP

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7PZP entry

There are 2 chains in PDB entry 7PZP (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 218	SER 1230
B	SER 220	ALA 506

There are 87 helices in PDB entry 7PZP. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	220	235	Right-handed alpha
Helix 2	AA2	A	238	252	Right-handed alpha
Helix 3	AA3	A	252	259	Right-handed alpha
Helix 4	AA4	A	260	272	Right-handed alpha
Helix 5	AA5	A	276	291	Right-handed alpha
Helix 6	AA6	A	295	310	Right-handed alpha
Helix 7	AA7	A	312	326	Right-handed alpha
Helix 8	AA8	A	330	337	Right-handed alpha
Helix 9	AA9	A	340	354	Right-handed alpha
Helix 10	AB1	A	374	379	Right-handed alpha
Helix 11	AB2	A	392	410	Right-handed alpha
Helix 12	AB3	A	424	463	Right-handed alpha
Helix 13	AB4	A	467	474	Right-handed alpha
Helix 14	AB5	A	475	490	Right-handed alpha
Helix 15	AB6	A	496	521	Right-handed alpha
Helix 16	AB7	A	521	538	Right-handed alpha
Helix 17	AB8	A	548	557	Right-handed alpha
Helix 18	AB9	A	561	565	Right-handed 310
Helix 19	AC1	A	568	587	Right-handed alpha
Helix 20	AC2	A	624	635	Right-handed alpha
Helix 21	AC3	A	676	687	Right-handed alpha
Helix 22	AC4	A	688	705	Right-handed alpha
Helix 23	AC5	A	710	723	Right-handed alpha
Helix 24	AC6	A	747	750	Right-handed 310
Helix 25	AC7	A	751	789	Right-handed alpha
Helix 26	AC8	A	818	824	Right-handed alpha
Helix 27	AC9	A	833	850	Right-handed alpha
Helix 28	AD1	A	856	867	Right-handed alpha
Helix 29	AD2	A	867	877	Right-handed alpha
Helix 30	AD3	A	883	888	Right-handed alpha
Helix 31	AD4	A	890	907	Right-handed alpha
Helix 32	AD5	A	925	936	Right-handed alpha
Helix 33	AD6	A	937	944	Right-handed alpha
Helix 34	AD7	A	954	973	Right-handed alpha
Helix 35	AD8	A	976	981	Right-handed alpha
Helix 36	AD9	A	986	999	Right-handed alpha
Helix 37	AE1	A	1003	1017	Right-handed alpha
Helix 38	AE2	A	1024	1044	Right-handed alpha
Helix 39	AE3	A	1044	1065	Right-handed alpha
Helix 40	AE4	A	1111	1143	Right-handed alpha
Helix 41	AE5	A	1159	1177	Right-handed alpha
Helix 42	AE6	A	1178	1191	Right-handed alpha
Helix 43	AE7	A	1197	1210	Right-handed alpha
Helix 44	AE8	A	1220	1225	Right-handed alpha
Helix 45	AE9	B	221	237	Right-handed alpha
Helix 46	AF1	B	238	252	Right-handed alpha
Helix 47	AF2	B	252	259	Right-handed alpha
Helix 48	AF3	B	260	275	Right-handed alpha
Helix 49	AF4	B	276	291	Right-handed alpha
Helix 50	AF5	B	295	309	Right-handed alpha
Helix 51	AF6	B	312	325	Right-handed alpha
Helix 52	AF7	B	329	337	Right-handed alpha
Helix 53	AF8	B	340	354	Right-handed alpha
Helix 54	AF9	B	371	376	Right-handed alpha
Helix 55	AG1	B	392	410	Right-handed alpha
Helix 56	AG2	B	424	462	Right-handed alpha
Helix 57	AG3	B	467	474	Right-handed alpha
Helix 58	AG4	B	475	490	Right-handed alpha
Helix 59	AG5	B	497	521	Right-handed alpha
Helix 60	AG6	B	521	538	Right-handed alpha
Helix 61	AG7	B	548	556	Right-handed alpha
Helix 62	AG8	B	561	565	Right-handed 310
Helix 63	AG9	B	568	587	Right-handed alpha
Helix 64	AH1	B	624	635	Right-handed alpha
Helix 65	AH2	B	676	687	Right-handed alpha
Helix 66	AH3	B	688	705	Right-handed alpha
Helix 67	AH4	B	710	723	Right-handed alpha
Helix 68	AH5	B	751	789	Right-handed alpha
Helix 69	AH6	B	818	824	Right-handed alpha
Helix 70	AH7	B	836	850	Right-handed alpha
Helix 71	AH8	B	856	867	Right-handed alpha
Helix 72	AH9	B	867	877	Right-handed alpha
Helix 73	AI1	B	883	888	Right-handed alpha
Helix 74	AI2	B	890	907	Right-handed alpha
Helix 75	AI3	B	925	936	Right-handed alpha
Helix 76	AI4	B	937	944	Right-handed alpha
Helix 77	AI5	B	954	973	Right-handed alpha
Helix 78	AI6	B	976	981	Right-handed alpha
Helix 79	AI7	B	986	999	Right-handed alpha
Helix 80	AI8	B	1003	1017	Right-handed alpha
Helix 81	AI9	B	1024	1044	Right-handed alpha
Helix 82	AJ1	B	1044	1065	Right-handed alpha
Helix 83	AJ2	B	1111	1143	Right-handed alpha
Helix 84	AJ3	B	1159	1177	Right-handed alpha
Helix 85	AJ4	B	1178	1192	Right-handed alpha
Helix 86	AJ5	B	1197	1210	Right-handed alpha
Helix 87	AJ6	B	1220	1225	Right-handed alpha

There are 14 sheets in PDB entry 7PZP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	411	415	first strand
Strand 2	A	638	642	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	588	590	first strand
Strand 2	A	602	604	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	607	609	first strand
Strand 2	A	620	622	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	794	795	first strand
Strand 2	A	706	709	anti-parallel
Strand 3	A	825	827	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	798	800	first strand
Strand 2	A	806	808	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	831	832	first strand
Strand 2	A	914	915	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	919	921	first strand
Strand 2	A	1152	1155	anti-parallel
Strand 3	A	1147	1149	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1069	1071	first strand
Strand 2	A	1077	1079	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	411	415	first strand
Strand 2	B	638	642	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	495	496	first strand
Strand 2	B	620	623	anti-parallel
Strand 3	B	606	608	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	794	795	first strand
Strand 2	B	706	709	anti-parallel
Strand 3	B	825	827	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	798	799	first strand
Strand 2	B	807	808	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	919	921	first strand
Strand 2	B	1152	1155	anti-parallel
Strand 3	B	1147	1149	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1069	1071	first strand
Strand 2	B	1077	1079	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7PZP

Analysis of interatomic Contacts of Structural Units in PDB entry:
7PZP