Analysis of interatomic Contacts of Structural Units in PDB entry:
7PZZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7PZZ entry

There are 6 chains in PDB entry 7PZZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 43	HIS 285
A	SER 287	GLU 517
B	ARG 44	HIS 285
B	SER 287	GLU 517
C	SER 43	HIS 285
C	SER 287	GLN 356

There are105 helices in PDB entry 7PZZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	43	53	Right-handed alpha
Helix 2	AA2	A	54	59	Right-handed alpha
Helix 3	AA3	A	59	76	Right-handed alpha
Helix 4	AA4	A	87	95	Right-handed alpha
Helix 5	AA5	A	96	101	Right-handed 310
Helix 6	AA6	A	115	133	Right-handed alpha
Helix 7	AA7	A	148	161	Right-handed alpha
Helix 8	AA8	A	172	175	Right-handed 310
Helix 9	AA9	A	177	181	Right-handed 310
Helix 10	AB1	A	191	196	Right-handed alpha
Helix 11	AB2	A	211	223	Right-handed alpha
Helix 12	AB3	A	239	251	Right-handed alpha
Helix 13	AB4	A	261	267	Right-handed alpha
Helix 14	AB5	A	272	276	Right-handed 310
Helix 15	AB6	A	285	289	Right-handed 310
Helix 16	AB7	A	316	325	Right-handed alpha
Helix 17	AB8	A	333	347	Right-handed alpha
Helix 18	AB9	A	349	373	Right-handed alpha
Helix 19	AC1	A	379	381	Right-handed 310
Helix 20	AC2	A	392	395	Right-handed 310
Helix 21	AC3	A	397	408	Right-handed alpha
Helix 22	AC4	A	433	439	Right-handed alpha
Helix 23	AC5	A	442	467	Right-handed alpha
Helix 24	AC6	A	471	482	Right-handed alpha
Helix 25	AC7	A	482	502	Right-handed alpha
Helix 26	AC8	A	509	513	Right-handed 310
Helix 27	AC9	B	45	53	Right-handed alpha
Helix 28	AD1	B	54	59	Right-handed alpha
Helix 29	AD2	B	59	76	Right-handed alpha
Helix 30	AD3	B	87	95	Right-handed alpha
Helix 31	AD4	B	96	101	Right-handed 310
Helix 32	AD5	B	115	133	Right-handed alpha
Helix 33	AD6	B	148	161	Right-handed alpha
Helix 34	AD7	B	172	175	Right-handed 310
Helix 35	AD8	B	177	181	Right-handed 310
Helix 36	AD9	B	191	196	Right-handed alpha
Helix 37	AE1	B	211	223	Right-handed alpha
Helix 38	AE2	B	239	251	Right-handed alpha
Helix 39	AE3	B	261	267	Right-handed alpha
Helix 40	AE4	B	272	276	Right-handed 310
Helix 41	AE5	B	285	289	Right-handed 310
Helix 42	AE6	B	304	308	Right-handed 310
Helix 43	AE7	B	316	325	Right-handed alpha
Helix 44	AE8	B	333	347	Right-handed alpha
Helix 45	AE9	B	349	373	Right-handed alpha
Helix 46	AF1	B	379	381	Right-handed 310
Helix 47	AF2	B	392	395	Right-handed 310
Helix 48	AF3	B	397	408	Right-handed alpha
Helix 49	AF4	B	433	439	Right-handed alpha
Helix 50	AF5	B	442	467	Right-handed alpha
Helix 51	AF6	B	471	482	Right-handed alpha
Helix 52	AF7	B	482	502	Right-handed alpha
Helix 53	AF8	B	509	513	Right-handed 310
Helix 54	AF9	C	44	53	Right-handed alpha
Helix 55	AG1	C	54	59	Right-handed alpha
Helix 56	AG2	C	59	76	Right-handed alpha
Helix 57	AG3	C	87	95	Right-handed alpha
Helix 58	AG4	C	96	101	Right-handed 310
Helix 59	AG5	C	115	133	Right-handed alpha
Helix 60	AG6	C	148	161	Right-handed alpha
Helix 61	AG7	C	172	175	Right-handed 310
Helix 62	AG8	C	177	181	Right-handed 310
Helix 63	AG9	C	191	196	Right-handed alpha
Helix 64	AH1	C	211	223	Right-handed alpha
Helix 65	AH2	C	239	251	Right-handed alpha
Helix 66	AH3	C	261	267	Right-handed alpha
Helix 67	AH4	C	272	276	Right-handed 310
Helix 68	AH5	C	285	289	Right-handed 310
Helix 69	AH6	C	316	325	Right-handed alpha
Helix 70	AH7	C	333	348	Right-handed alpha
Helix 71	AH8	C	349	373	Right-handed alpha
Helix 72	AH9	C	379	381	Right-handed 310
Helix 73	AI1	C	392	395	Right-handed 310
Helix 74	AI2	C	397	408	Right-handed alpha
Helix 75	AI3	C	433	439	Right-handed alpha
Helix 76	AI4	C	442	467	Right-handed alpha
Helix 77	AI5	C	471	482	Right-handed alpha
Helix 78	AI6	C	482	502	Right-handed alpha
Helix 79	AI7	C	509	513	Right-handed 310
Helix 80	AI8	D	39	53	Right-handed alpha
Helix 81	AI9	D	54	59	Right-handed alpha
Helix 82	AJ1	D	59	76	Right-handed alpha
Helix 83	AJ2	D	87	95	Right-handed alpha
Helix 84	AJ3	D	96	101	Right-handed 310
Helix 85	AJ4	D	115	133	Right-handed alpha
Helix 86	AJ5	D	148	161	Right-handed alpha
Helix 87	AJ6	D	172	175	Right-handed 310
Helix 88	AJ7	D	177	181	Right-handed 310
Helix 89	AJ8	D	191	196	Right-handed alpha
Helix 90	AJ9	D	211	223	Right-handed alpha
Helix 91	AK1	D	239	251	Right-handed alpha
Helix 92	AK2	D	261	267	Right-handed alpha
Helix 93	AK3	D	272	276	Right-handed 310
Helix 94	AK4	D	285	289	Right-handed 310
Helix 95	AK5	D	316	325	Right-handed alpha
Helix 96	AK6	D	333	348	Right-handed alpha
Helix 97	AK7	D	349	373	Right-handed alpha
Helix 98	AK8	D	379	381	Right-handed 310
Helix 99	AK9	D	392	395	Right-handed 310
Helix 100	AL1	D	397	408	Right-handed alpha
Helix 101	AL2	D	433	439	Right-handed alpha
Helix 102	AL3	D	442	467	Right-handed alpha
Helix 103	AL4	D	471	482	Right-handed alpha
Helix 104	AL5	D	482	502	Right-handed alpha
Helix 105	AL6	D	509	513	Right-handed 310

There are 19 sheets in PDB entry 7PZZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	78	first strand
Strand 2	A	410	411	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	106	first strand
Strand 2	A	109	110	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	140	143	first strand
Strand 2	A	294	299	anti-parallel
Strand 3	A	279	283	anti-parallel
Strand 4	A	253	257	parallel
Strand 5	A	226	229	parallel
Strand 6	A	166	170	parallel
Strand 7	A	197	201	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	302	305	first strand
Strand 2	A	311	313	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	377	first strand
Strand 2	A	386	390	anti-parallel
Strand 3	A	428	432	anti-parallel
Strand 4	A	413	415	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	78	first strand
Strand 2	B	410	411	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	105	106	first strand
Strand 2	B	109	110	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	140	143	first strand
Strand 2	B	294	299	anti-parallel
Strand 3	B	279	283	anti-parallel
Strand 4	B	253	257	parallel
Strand 5	B	226	229	parallel
Strand 6	B	166	170	parallel
Strand 7	B	197	201	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	377	first strand
Strand 2	B	386	390	anti-parallel
Strand 3	B	428	432	anti-parallel
Strand 4	B	413	415	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	78	first strand
Strand 2	C	410	411	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	105	106	first strand
Strand 2	C	109	110	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	140	143	first strand
Strand 2	C	294	299	anti-parallel
Strand 3	C	279	283	anti-parallel
Strand 4	C	253	257	parallel
Strand 5	C	226	229	parallel
Strand 6	C	166	170	parallel
Strand 7	C	197	201	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	302	305	first strand
Strand 2	C	311	313	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	376	377	first strand
Strand 2	C	386	390	anti-parallel
Strand 3	C	428	432	anti-parallel
Strand 4	C	413	415	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	78	first strand
Strand 2	D	410	411	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	105	106	first strand
Strand 2	D	109	110	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	140	143	first strand
Strand 2	D	294	299	anti-parallel
Strand 3	D	279	283	anti-parallel
Strand 4	D	253	257	parallel
Strand 5	D	226	229	parallel
Strand 6	D	166	170	parallel
Strand 7	D	197	201	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	302	305	first strand
Strand 2	D	311	313	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	376	377	first strand
Strand 2	D	386	390	anti-parallel
Strand 3	D	428	432	anti-parallel
Strand 4	D	413	415	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7PZZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7PZZ