Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q13


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Q13 entry

There are 8 chains in PDB entry 7Q13 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 29PRO 618
E
 SER 318LEU 349
F
 SER 318LEU 349
G
 SER 318LEU 349
H
 SER 318LEU 349
B
 LEU 29PRO 618
C
 LEU 29PRO 618
D
 LEU 29PRO 618
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are100 helices in PDB entry 7Q13. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 57Right-handed alpha
Helix 2
AA2
A
125 137Right-handed alpha
Helix 3
AA3
A
145 169Right-handed alpha
Helix 4
AA4
A
182 184Right-handed 310
Helix 5
AA5
A
185 195Right-handed alpha
Helix 6
AA6
A
207 215Right-handed alpha
Helix 7
AA7
A
228 233Right-handed alpha
Helix 8
AA8
A
239 252Right-handed alpha
Helix 9
AA9
A
259 270Right-handed alpha
Helix 10
AB1
A
291 312Right-handed alpha
Helix 11
AB2
A
339 356Right-handed alpha
Helix 12
AB3
A
376 411Right-handed alpha
Helix 13
AB4
A
421 435Right-handed alpha
Helix 14
AB5
A
454 463Right-handed alpha
Helix 15
AB6
A
492 500Right-handed alpha
Helix 16
AB7
A
514 522Right-handed alpha
Helix 17
AB8
A
532 540Right-handed alpha
Helix 18
AB9
A
559 577Right-handed alpha
Helix 19
AC1
A
578 591Right-handed alpha
Helix 20
AC2
A
592 596Right-handed 310
Helix 21
AC3
A
597 602Right-handed alpha
Helix 22
AC4
A
602 617Right-handed alpha
Helix 23
AC5
E
319 328Right-handed alpha
Helix 24
AC6
E
337 346Right-handed alpha
Helix 25
AC7
E
347 349Right-handed 310
Helix 26
AC8
F
319 328Right-handed alpha
Helix 27
AC9
F
337 346Right-handed alpha
Helix 28
AD1
F
347 349Right-handed 310
Helix 29
AD2
G
319 328Right-handed alpha
Helix 30
AD3
G
337 346Right-handed alpha
Helix 31
AD4
G
347 349Right-handed 310
Helix 32
AD5
H
319 328Right-handed alpha
Helix 33
AD6
H
337 346Right-handed alpha
Helix 34
AD7
H
347 349Right-handed 310
Helix 35
AD8
B
43 57Right-handed alpha
Helix 36
AD9
B
125 137Right-handed alpha
Helix 37
AE1
B
145 169Right-handed alpha
Helix 38
AE2
B
182 184Right-handed 310
Helix 39
AE3
B
185 195Right-handed alpha
Helix 40
AE4
B
207 215Right-handed alpha
Helix 41
AE5
B
228 233Right-handed alpha
Helix 42
AE6
B
239 252Right-handed alpha
Helix 43
AE7
B
259 270Right-handed alpha
Helix 44
AE8
B
291 312Right-handed alpha
Helix 45
AE9
B
339 356Right-handed alpha
Helix 46
AF1
B
376 411Right-handed alpha
Helix 47
AF2
B
421 435Right-handed alpha
Helix 48
AF3
B
454 463Right-handed alpha
Helix 49
AF4
B
492 500Right-handed alpha
Helix 50
AF5
B
514 522Right-handed alpha
Helix 51
AF6
B
532 540Right-handed alpha
Helix 52
AF7
B
559 577Right-handed alpha
Helix 53
AF8
B
578 591Right-handed alpha
Helix 54
AF9
B
592 596Right-handed 310
Helix 55
AG1
B
597 602Right-handed alpha
Helix 56
AG2
B
602 617Right-handed alpha
Helix 57
AG3
C
43 57Right-handed alpha
Helix 58
AG4
C
125 137Right-handed alpha
Helix 59
AG5
C
145 169Right-handed alpha
Helix 60
AG6
C
182 184Right-handed 310
Helix 61
AG7
C
185 195Right-handed alpha
Helix 62
AG8
C
207 215Right-handed alpha
Helix 63
AG9
C
228 233Right-handed alpha
Helix 64
AH1
C
239 252Right-handed alpha
Helix 65
AH2
C
259 270Right-handed alpha
Helix 66
AH3
C
291 312Right-handed alpha
Helix 67
AH4
C
339 356Right-handed alpha
Helix 68
AH5
C
376 411Right-handed alpha
Helix 69
AH6
C
421 435Right-handed alpha
Helix 70
AH7
C
454 463Right-handed alpha
Helix 71
AH8
C
492 500Right-handed alpha
Helix 72
AH9
C
514 522Right-handed alpha
Helix 73
AI1
C
532 540Right-handed alpha
Helix 74
AI2
C
559 577Right-handed alpha
Helix 75
AI3
C
578 591Right-handed alpha
Helix 76
AI4
C
592 596Right-handed 310
Helix 77
AI5
C
597 602Right-handed alpha
Helix 78
AI6
C
602 617Right-handed alpha
Helix 79
AI7
D
43 57Right-handed alpha
Helix 80
AI8
D
125 137Right-handed alpha
Helix 81
AI9
D
145 169Right-handed alpha
Helix 82
AJ1
D
182 184Right-handed 310
Helix 83
AJ2
D
185 195Right-handed alpha
Helix 84
AJ3
D
207 215Right-handed alpha
Helix 85
AJ4
D
228 233Right-handed alpha
Helix 86
AJ5
D
239 252Right-handed alpha
Helix 87
AJ6
D
259 270Right-handed alpha
Helix 88
AJ7
D
291 312Right-handed alpha
Helix 89
AJ8
D
339 356Right-handed alpha
Helix 90
AJ9
D
376 411Right-handed alpha
Helix 91
AK1
D
421 435Right-handed alpha
Helix 92
AK2
D
454 463Right-handed alpha
Helix 93
AK3
D
492 500Right-handed alpha
Helix 94
AK4
D
514 522Right-handed alpha
Helix 95
AK5
D
532 540Right-handed alpha
Helix 96
AK6
D
559 577Right-handed alpha
Helix 97
AK7
D
578 591Right-handed alpha
Helix 98
AK8
D
592 596Right-handed 310
Helix 99
AK9
D
597 602Right-handed alpha
Helix 100
AL1
D
602 617Right-handed alpha
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There are 12 sheets in PDB entry 7Q13. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 104first strand
Strand 2
A
113 117anti-parallel
Strand 3
A
63 66parallel
Strand 4
A
30 32parallel
Strand 5
A
176 180parallel
Strand 6
A
199 204parallel
Strand 7
A
254 257parallel
Strand 8
A
276 277parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 477first strand
Strand 2
A
361 366parallel
Strand 3
A
323 328parallel
Strand 4
A
502 504parallel
Strand 5
A
526 527parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 375first strand
Strand 2
A
446 448anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 104first strand
Strand 2
B
113 117anti-parallel
Strand 3
B
63 66parallel
Strand 4
B
30 32parallel
Strand 5
B
176 180parallel
Strand 6
B
199 204parallel
Strand 7
B
254 257parallel
Strand 8
B
276 277parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
473 477first strand
Strand 2
B
361 366parallel
Strand 3
B
323 328parallel
Strand 4
B
502 504parallel
Strand 5
B
526 527parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 375first strand
Strand 2
B
446 448anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
101 104first strand
Strand 2
C
113 117anti-parallel
Strand 3
C
63 66parallel
Strand 4
C
30 32parallel
Strand 5
C
176 180parallel
Strand 6
C
199 204parallel
Strand 7
C
254 257parallel
Strand 8
C
276 277parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
473 477first strand
Strand 2
C
361 366parallel
Strand 3
C
323 328parallel
Strand 4
C
502 504parallel
Strand 5
C
526 527parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
372 375first strand
Strand 2
C
446 448anti-parallel
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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
101 104first strand
Strand 2
D
113 117anti-parallel
Strand 3
D
63 66parallel
Strand 4
D
30 32parallel
Strand 5
D
176 180parallel
Strand 6
D
199 204parallel
Strand 7
D
254 257parallel
Strand 8
D
276 277parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
473 477first strand
Strand 2
D
361 366parallel
Strand 3
D
323 328parallel
Strand 4
D
502 504parallel
Strand 5
D
526 527parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
372 375first strand
Strand 2
D
446 448anti-parallel
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