Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q1C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Q1C entry

There are 2 chains in PDB entry 7Q1C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 13ARG 468
B
 LEU 13ARG 467
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 7Q1C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 34Right-handed 310
Helix 2
AA2
A
35 47Right-handed alpha
Helix 3
AA3
A
49 53Right-handed 310
Helix 4
AA4
A
80 84Right-handed 310
Helix 5
AA5
A
89 99Right-handed alpha
Helix 6
AA6
A
100 102Right-handed 310
Helix 7
AA7
A
145 149Right-handed 310
Helix 8
AA8
A
154 158Right-handed 310
Helix 9
AA9
A
162 183Right-handed alpha
Helix 10
AB1
A
211 224Right-handed alpha
Helix 11
AB2
A
241 248Right-handed alpha
Helix 12
AB3
A
278 282Right-handed 310
Helix 13
AB4
A
295 315Right-handed alpha
Helix 14
AB5
A
341 359Right-handed alpha
Helix 15
AB6
A
372 396Right-handed alpha
Helix 16
AB7
A
422 426Right-handed 310
Helix 17
AB8
A
450 465Right-handed alpha
Helix 18
AB9
B
30 34Right-handed 310
Helix 19
AC1
B
35 47Right-handed alpha
Helix 20
AC2
B
49 53Right-handed 310
Helix 21
AC3
B
80 84Right-handed 310
Helix 22
AC4
B
89 99Right-handed alpha
Helix 23
AC5
B
100 102Right-handed 310
Helix 24
AC6
B
145 149Right-handed 310
Helix 25
AC7
B
154 158Right-handed 310
Helix 26
AC8
B
162 183Right-handed alpha
Helix 27
AC9
B
211 224Right-handed alpha
Helix 28
AD1
B
241 248Right-handed alpha
Helix 29
AD2
B
278 282Right-handed 310
Helix 30
AD3
B
295 315Right-handed alpha
Helix 31
AD4
B
341 360Right-handed alpha
Helix 32
AD5
B
372 395Right-handed alpha
Helix 33
AD6
B
422 427Right-handed 310
Helix 34
AD7
B
450 459Right-handed alpha
Helix 35
AD8
B
460 467Right-handed alpha
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There are 2 sheets in PDB entry 7Q1C. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 72first strand
Strand 2
A
17 20parallel
Strand 3
A
188 191parallel
Strand 4
A
362 366parallel
Strand 5
A
318 324parallel
Strand 6
A
230 235parallel
Strand 7
A
254 261parallel
Strand 8
A
285 290parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 72first strand
Strand 2
B
17 20parallel
Strand 3
B
188 191parallel
Strand 4
B
362 366parallel
Strand 5
B
318 324parallel
Strand 6
B
230 235parallel
Strand 7
B
254 261parallel
Strand 8
B
285 290parallel
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