Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Q1V entry

There are 3 chains in PDB entry 7Q1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 GLU 95ASN 231
E
 GLU 95ASN 231
F
 GLU 95ASN 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7Q1V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
95 111Right-handed alpha
Helix 2
AA2
D
116 127Right-handed alpha
Helix 3
AA3
D
129 138Right-handed alpha
Helix 4
AA4
D
139 141Right-handed 310
Helix 5
AA5
D
145 150Right-handed alpha
Helix 6
AA6
D
206 211Right-handed alpha
Helix 7
AA7
E
96 111Right-handed alpha
Helix 8
AA8
E
116 127Right-handed alpha
Helix 9
AA9
E
129 138Right-handed alpha
Helix 10
AB1
E
139 141Right-handed 310
Helix 11
AB2
E
145 150Right-handed alpha
Helix 12
AB3
E
206 211Right-handed alpha
Helix 13
AB4
F
96 111Right-handed alpha
Helix 14
AB5
F
116 127Right-handed alpha
Helix 15
AB6
F
129 138Right-handed alpha
Helix 16
AB7
F
139 141Right-handed 310
Helix 17
AB8
F
145 150Right-handed alpha
Helix 18
AB9
F
206 211Right-handed alpha
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There are 3 sheets in PDB entry 7Q1V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
154 165first strand
Strand 2
D
170 181anti-parallel
Strand 3
D
190 200anti-parallel
Strand 4
D
217 226anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
154 165first strand
Strand 2
E
170 181anti-parallel
Strand 3
E
190 200anti-parallel
Strand 4
E
217 226anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
154 165first strand
Strand 2
F
170 181anti-parallel
Strand 3
F
190 200anti-parallel
Strand 4
F
217 226anti-parallel
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