Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q3H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7Q3H entry

There are 5 chains in PDB entry 7Q3H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 38	HIS 639
E	VAL 38	HIS 639
D	VAL 38	HIS 639
C	VAL 38	HIS 639
B	VAL 38	HIS 639

There are 60 helices in PDB entry 7Q3H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	89	100	Right-handed alpha
Helix 2	AA2	A	108	114	Right-handed alpha
Helix 3	AA3	A	362	365	Right-handed 310
Helix 4	AA4	A	367	372	Right-handed alpha
Helix 5	AA5	A	382	391	Right-handed alpha
Helix 6	AA6	A	437	441	Right-handed 310
Helix 7	AA7	A	514	522	Right-handed alpha
Helix 8	AA8	A	522	536	Right-handed alpha
Helix 9	AA9	A	537	539	Right-handed 310
Helix 10	AB1	A	541	563	Right-handed alpha
Helix 11	AB2	A	574	604	Right-handed alpha
Helix 12	AB3	A	605	637	Right-handed alpha
Helix 13	AB4	E	89	100	Right-handed alpha
Helix 14	AB5	E	108	114	Right-handed alpha
Helix 15	AB6	E	362	365	Right-handed 310
Helix 16	AB7	E	367	372	Right-handed alpha
Helix 17	AB8	E	382	391	Right-handed alpha
Helix 18	AB9	E	437	441	Right-handed 310
Helix 19	AC1	E	514	522	Right-handed alpha
Helix 20	AC2	E	522	536	Right-handed alpha
Helix 21	AC3	E	537	539	Right-handed 310
Helix 22	AC4	E	541	563	Right-handed alpha
Helix 23	AC5	E	574	604	Right-handed alpha
Helix 24	AC6	E	605	637	Right-handed alpha
Helix 25	AC7	D	89	100	Right-handed alpha
Helix 26	AC8	D	108	114	Right-handed alpha
Helix 27	AC9	D	362	365	Right-handed 310
Helix 28	AD1	D	367	372	Right-handed alpha
Helix 29	AD2	D	382	391	Right-handed alpha
Helix 30	AD3	D	437	441	Right-handed 310
Helix 31	AD4	D	514	522	Right-handed alpha
Helix 32	AD5	D	522	536	Right-handed alpha
Helix 33	AD6	D	537	539	Right-handed 310
Helix 34	AD7	D	541	563	Right-handed alpha
Helix 35	AD8	D	574	604	Right-handed alpha
Helix 36	AD9	D	605	637	Right-handed alpha
Helix 37	AE1	C	89	100	Right-handed alpha
Helix 38	AE2	C	108	114	Right-handed alpha
Helix 39	AE3	C	362	365	Right-handed 310
Helix 40	AE4	C	367	372	Right-handed alpha
Helix 41	AE5	C	382	391	Right-handed alpha
Helix 42	AE6	C	437	441	Right-handed 310
Helix 43	AE7	C	514	522	Right-handed alpha
Helix 44	AE8	C	522	536	Right-handed alpha
Helix 45	AE9	C	537	539	Right-handed 310
Helix 46	AF1	C	541	563	Right-handed alpha
Helix 47	AF2	C	574	604	Right-handed alpha
Helix 48	AF3	C	605	637	Right-handed alpha
Helix 49	AF4	B	89	100	Right-handed alpha
Helix 50	AF5	B	108	114	Right-handed alpha
Helix 51	AF6	B	362	365	Right-handed 310
Helix 52	AF7	B	367	372	Right-handed alpha
Helix 53	AF8	B	382	391	Right-handed alpha
Helix 54	AF9	B	437	441	Right-handed 310
Helix 55	AG1	B	514	522	Right-handed alpha
Helix 56	AG2	B	522	536	Right-handed alpha
Helix 57	AG3	B	537	539	Right-handed 310
Helix 58	AG4	B	541	563	Right-handed alpha
Helix 59	AG5	B	574	604	Right-handed alpha
Helix 60	AG6	B	605	637	Right-handed alpha

There are 25 sheets in PDB entry 7Q3H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	45	first strand
Strand 2	A	166	170	anti-parallel
Strand 3	A	70	73	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	204	212	first strand
Strand 2	A	298	306	anti-parallel
Strand 3	A	231	238	anti-parallel
Strand 4	A	269	274	anti-parallel
Strand 5	A	261	262	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	218	222	first strand
Strand 2	A	283	287	anti-parallel
Strand 3	A	246	250	anti-parallel
Strand 4	A	256	258	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	379	first strand
Strand 2	A	402	415	anti-parallel
Strand 3	A	420	432	anti-parallel
Strand 4	A	348	360	anti-parallel
Strand 5	A	328	343	anti-parallel
Strand 6	A	461	466	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	397	399	first strand
Strand 2	A	445	454	anti-parallel
Strand 3	A	501	513	anti-parallel
Strand 4	A	482	495	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	41	45	first strand
Strand 2	E	166	170	anti-parallel
Strand 3	E	70	73	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	204	212	first strand
Strand 2	E	298	306	anti-parallel
Strand 3	E	231	238	anti-parallel
Strand 4	E	269	274	anti-parallel
Strand 5	E	261	262	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	218	222	first strand
Strand 2	E	283	287	anti-parallel
Strand 3	E	246	250	anti-parallel
Strand 4	E	256	258	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	376	379	first strand
Strand 2	E	402	415	anti-parallel
Strand 3	E	420	432	anti-parallel
Strand 4	E	348	360	anti-parallel
Strand 5	E	328	343	anti-parallel
Strand 6	E	461	466	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	397	399	first strand
Strand 2	E	445	454	anti-parallel
Strand 3	E	501	513	anti-parallel
Strand 4	E	482	495	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	45	first strand
Strand 2	D	166	170	anti-parallel
Strand 3	D	70	73	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	204	212	first strand
Strand 2	D	298	306	anti-parallel
Strand 3	D	231	238	anti-parallel
Strand 4	D	269	274	anti-parallel
Strand 5	D	261	262	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	218	222	first strand
Strand 2	D	283	287	anti-parallel
Strand 3	D	246	250	anti-parallel
Strand 4	D	256	258	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	376	379	first strand
Strand 2	D	402	415	anti-parallel
Strand 3	D	420	432	anti-parallel
Strand 4	D	348	360	anti-parallel
Strand 5	D	328	343	anti-parallel
Strand 6	D	461	466	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	397	399	first strand
Strand 2	D	445	454	anti-parallel
Strand 3	D	501	513	anti-parallel
Strand 4	D	482	495	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	45	first strand
Strand 2	C	166	170	anti-parallel
Strand 3	C	70	73	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	204	212	first strand
Strand 2	C	298	306	anti-parallel
Strand 3	C	231	238	anti-parallel
Strand 4	C	269	274	anti-parallel
Strand 5	C	261	262	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	218	222	first strand
Strand 2	C	283	287	anti-parallel
Strand 3	C	246	250	anti-parallel
Strand 4	C	256	258	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	376	379	first strand
Strand 2	C	402	415	anti-parallel
Strand 3	C	420	432	anti-parallel
Strand 4	C	348	360	anti-parallel
Strand 5	C	328	343	anti-parallel
Strand 6	C	461	466	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	397	399	first strand
Strand 2	C	445	454	anti-parallel
Strand 3	C	501	513	anti-parallel
Strand 4	C	482	495	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	45	first strand
Strand 2	B	166	170	anti-parallel
Strand 3	B	70	73	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	204	212	first strand
Strand 2	B	298	306	anti-parallel
Strand 3	B	231	238	anti-parallel
Strand 4	B	269	274	anti-parallel
Strand 5	B	261	262	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	218	222	first strand
Strand 2	B	283	287	anti-parallel
Strand 3	B	246	250	anti-parallel
Strand 4	B	256	258	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	379	first strand
Strand 2	B	402	415	anti-parallel
Strand 3	B	420	432	anti-parallel
Strand 4	B	348	360	anti-parallel
Strand 5	B	328	343	anti-parallel
Strand 6	B	461	466	parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	397	399	first strand
Strand 2	B	445	454	anti-parallel
Strand 3	B	501	513	anti-parallel
Strand 4	B	482	495	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7Q3H

Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q3H