Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q3L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7Q3L entry

There are 9 chains in PDB entry 7Q3L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	LYS 452	LEU 711
C	MET 1	PHE 1217
E	GLU 12	ASP 81
G	ILE 9	VAL 89
2	G 25	A 66
9	ILE 392	ASN 488
q	ASN 132	PRO 251
A	GLU 491	LEU 1304
p	GLU 157	GLN 174

There are 98 helices in PDB entry 7Q3L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	453	458	Right-handed alpha
Helix 2	AA2	B	461	469	Right-handed alpha
Helix 3	AA3	B	471	475	Right-handed 310
Helix 4	AA4	B	476	482	Right-handed 310
Helix 5	AA5	B	484	493	Right-handed alpha
Helix 6	AA6	B	501	506	Right-handed 310
Helix 7	AA7	B	525	530	Right-handed alpha
Helix 8	AA8	B	569	577	Right-handed alpha
Helix 9	AA9	C	189	194	Right-handed alpha
Helix 10	AB1	C	198	203	Right-handed alpha
Helix 11	AB2	C	429	432	Right-handed 310
Helix 12	AB3	C	808	825	Right-handed alpha
Helix 13	AB4	C	832	845	Right-handed alpha
Helix 14	AB5	C	848	853	Right-handed alpha
Helix 15	AB6	C	1072	1076	Right-handed 310
Helix 16	AB7	C	1134	1152	Right-handed alpha
Helix 17	AB8	C	1159	1165	Right-handed alpha
Helix 18	AB9	C	1176	1180	Right-handed alpha
Helix 19	AC1	C	1181	1185	Right-handed 310
Helix 20	AC2	C	1186	1196	Right-handed alpha
Helix 21	AC3	C	1200	1216	Right-handed alpha
Helix 22	AC4	E	12	18	Right-handed 310
Helix 23	AC5	E	27	46	Right-handed alpha
Helix 24	AC6	E	46	58	Right-handed alpha
Helix 25	AC7	E	60	72	Right-handed alpha
Helix 26	AC8	G	47	55	Right-handed 310
Helix 27	AC9	G	73	78	Right-handed alpha
Helix 28	AD1	G	79	83	Right-handed 310
Helix 29	AD2	9	394	399	Right-handed alpha
Helix 30	AD3	9	418	423	Right-handed alpha
Helix 31	AD4	9	424	427	Right-handed 310
Helix 32	AD5	9	428	438	Right-handed alpha
Helix 33	AD6	9	443	447	Right-handed 310
Helix 34	AD7	9	451	469	Right-handed alpha
Helix 35	AD8	9	472	476	Right-handed 310
Helix 36	AD9	q	146	155	Right-handed alpha
Helix 37	AE1	q	191	201	Right-handed alpha
Helix 38	AE2	q	241	245	Right-handed alpha
Helix 39	AE3	A	492	506	Right-handed alpha
Helix 40	AE4	A	508	527	Right-handed alpha
Helix 41	AE5	A	527	541	Right-handed alpha
Helix 42	AE6	A	545	564	Right-handed alpha
Helix 43	AE7	A	565	568	Right-handed 310
Helix 44	AE8	A	570	579	Right-handed alpha
Helix 45	AE9	A	580	584	Right-handed 310
Helix 46	AF1	A	586	604	Right-handed alpha
Helix 47	AF2	A	605	618	Right-handed alpha
Helix 48	AF3	A	621	639	Right-handed alpha
Helix 49	AF4	A	640	652	Right-handed alpha
Helix 50	AF5	A	657	676	Right-handed alpha
Helix 51	AF6	A	677	681	Right-handed 310
Helix 52	AF7	A	682	691	Right-handed alpha
Helix 53	AF8	A	692	696	Right-handed 310
Helix 54	AF9	A	698	717	Right-handed alpha
Helix 55	AG1	A	720	736	Right-handed alpha
Helix 56	AG2	A	740	754	Right-handed alpha
Helix 57	AG3	A	755	757	Right-handed 310
Helix 58	AG4	A	758	777	Right-handed alpha
Helix 59	AG5	A	781	798	Right-handed alpha
Helix 60	AG6	A	802	810	Right-handed alpha
Helix 61	AG7	A	810	819	Right-handed alpha
Helix 62	AG8	A	820	825	Right-handed 310
Helix 63	AG9	A	826	845	Right-handed alpha
Helix 64	AH1	A	845	854	Right-handed alpha
Helix 65	AH2	A	855	857	Right-handed 310
Helix 66	AH3	A	861	880	Right-handed alpha
Helix 67	AH4	A	885	903	Right-handed alpha
Helix 68	AH5	A	907	922	Right-handed alpha
Helix 69	AH6	A	923	927	Right-handed 310
Helix 70	AH7	A	928	941	Right-handed alpha
Helix 71	AH8	A	944	963	Right-handed alpha
Helix 72	AH9	A	966	982	Right-handed alpha
Helix 73	AI1	A	986	1002	Right-handed alpha
Helix 74	AI2	A	1005	1009	Right-handed 310
Helix 75	AI3	A	1012	1021	Right-handed alpha
Helix 76	AI4	A	1022	1026	Right-handed 310
Helix 77	AI5	A	1028	1046	Right-handed alpha
Helix 78	AI6	A	1047	1050	Right-handed 310
Helix 79	AI7	A	1051	1063	Right-handed alpha
Helix 80	AI8	A	1064	1068	Right-handed 310
Helix 81	AI9	A	1070	1089	Right-handed alpha
Helix 82	AJ1	A	1089	1101	Right-handed alpha
Helix 83	AJ2	A	1105	1122	Right-handed alpha
Helix 84	AJ3	A	1124	1127	Right-handed 310
Helix 85	AJ4	A	1128	1137	Right-handed alpha
Helix 86	AJ5	A	1140	1159	Right-handed alpha
Helix 87	AJ6	A	1160	1164	Right-handed 310
Helix 88	AJ7	A	1165	1179	Right-handed alpha
Helix 89	AJ8	A	1181	1200	Right-handed alpha
Helix 90	AJ9	A	1204	1216	Right-handed alpha
Helix 91	AK1	A	1217	1221	Right-handed 310
Helix 92	AK2	A	1223	1241	Right-handed alpha
Helix 93	AK3	A	1242	1251	Right-handed alpha
Helix 94	AK4	A	1252	1254	Right-handed 310
Helix 95	AK5	A	1258	1277	Right-handed alpha
Helix 96	AK6	A	1279	1284	Right-handed alpha
Helix 97	AK7	A	1297	1302	Right-handed alpha
Helix 98	AK8	p	158	174	Right-handed alpha

There are 28 sheets in PDB entry 7Q3L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1101	1107	first strand
Strand 2	C	1116	1121	anti-parallel
Strand 3	C	1126	1131	anti-parallel
Strand 4	C	3	9	anti-parallel
Strand 5	C	1173	1175	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	16	20	first strand
Strand 2	C	29	33	anti-parallel
Strand 3	C	37	43	anti-parallel
Strand 4	C	50	57	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	68	first strand
Strand 2	C	77	82	anti-parallel
Strand 3	C	86	93	anti-parallel
Strand 4	C	98	106	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	120	123	first strand
Strand 2	C	129	133	anti-parallel
Strand 3	C	139	146	anti-parallel
Strand 4	C	152	154	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	120	123	first strand
Strand 2	C	129	133	anti-parallel
Strand 3	C	139	146	anti-parallel
Strand 4	C	158	159	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	165	173	first strand
Strand 2	C	181	188	anti-parallel
Strand 3	C	207	214	anti-parallel
Strand 4	C	219	227	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	232	237	first strand
Strand 2	C	248	252	anti-parallel
Strand 3	C	255	259	anti-parallel
Strand 4	C	267	270	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	273	274	first strand
Strand 2	C	386	387	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	287	295	first strand
Strand 2	C	298	305	anti-parallel
Strand 3	C	309	318	anti-parallel
Strand 4	C	321	332	anti-parallel
Strand 5	C	372	374	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	336	342	first strand
Strand 2	C	346	351	anti-parallel
Strand 3	C	356	361	anti-parallel
Strand 4	C	395	401	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	407	413	first strand
Strand 2	C	422	427	anti-parallel
Strand 3	C	434	440	anti-parallel
Strand 4	C	774	780	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	445	450	first strand
Strand 2	C	761	766	anti-parallel
Strand 3	C	753	758	anti-parallel
Strand 4	C	741	745	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	458	462	first strand
Strand 2	C	473	477	anti-parallel
Strand 3	C	482	486	anti-parallel
Strand 4	C	492	494	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	507	510	first strand
Strand 2	C	516	520	anti-parallel
Strand 3	C	523	527	anti-parallel
Strand 4	C	534	537	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	544	549	first strand
Strand 2	C	553	558	anti-parallel
Strand 3	C	562	568	anti-parallel
Strand 4	C	574	576	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	544	549	first strand
Strand 2	C	553	558	anti-parallel
Strand 3	C	562	568	anti-parallel
Strand 4	C	581	582	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	587	592	first strand
Strand 2	C	604	609	anti-parallel
Strand 3	C	613	618	anti-parallel
Strand 4	C	626	632	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	637	643	first strand
Strand 2	C	664	669	anti-parallel
Strand 3	C	673	678	anti-parallel
Strand 4	C	686	690	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	700	706	first strand
Strand 2	C	709	715	anti-parallel
Strand 3	C	719	724	anti-parallel
Strand 4	C	729	733	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	785	790	first strand
Strand 2	C	797	804	anti-parallel
Strand 3	C	862	869	anti-parallel
Strand 4	C	876	881	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	886	895	first strand
Strand 2	C	903	911	anti-parallel
Strand 3	C	923	931	anti-parallel
Strand 4	C	936	945	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	949	955	first strand
Strand 2	C	958	963	anti-parallel
Strand 3	C	966	971	anti-parallel
Strand 4	C	978	983	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	990	996	first strand
Strand 2	C	999	1004	anti-parallel
Strand 3	C	1009	1015	anti-parallel
Strand 4	C	1020	1026	anti-parallel
Strand 5	C	1087	1088	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1033	1040	first strand
Strand 2	C	1043	1048	anti-parallel
Strand 3	C	1052	1057	anti-parallel
Strand 4	C	1090	1096	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	21	22	first strand
Strand 2	G	67	68	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	39	42	first strand
Strand 2	G	70	72	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	9	407	408	first strand
Strand 2	9	414	415	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	q	185	187	first strand
Strand 2	q	134	138	anti-parallel
Strand 3	q	212	214	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7Q3L

Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q3L