Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q3S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Q3S entry

There is 1 chain in PDB entry 7Q3S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 6LEU 479
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 7Q3S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 33Right-handed alpha
Helix 2
AA2
A
55 63Right-handed alpha
Helix 3
AA3
A
76 80Right-handed 310
Helix 4
AA4
A
85 97Right-handed alpha
Helix 5
AA5
A
97 107Right-handed alpha
Helix 6
AA6
A
108 111Right-handed 310
Helix 7
AA7
A
122 124Right-handed 310
Helix 8
AA8
A
125 133Right-handed alpha
Helix 9
AA9
A
143 159Right-handed alpha
Helix 10
AB1
A
163 168Right-handed 310
Helix 11
AB2
A
183 185Right-handed 310
Helix 12
AB3
A
186 191Right-handed 310
Helix 13
AB4
A
192 195Right-handed 310
Helix 14
AB5
A
196 207Right-handed alpha
Helix 15
AB6
A
208 211Right-handed 310
Helix 16
AB7
A
220 223Right-handed 310
Helix 17
AB8
A
224 232Right-handed alpha
Helix 18
AB9
A
266 279Right-handed alpha
Helix 19
AC1
A
298 313Right-handed alpha
Helix 20
AC2
A
340 345Right-handed alpha
Helix 21
AC3
A
357 363Right-handed alpha
Helix 22
AC4
A
375 386Right-handed alpha
Helix 23
AC5
A
397 407Right-handed alpha
Helix 24
AC6
A
424 438Right-handed alpha
Helix 25
AC7
A
438 460Right-handed alpha
Helix 26
AC8
A
463 479Right-handed alpha
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There are 3 sheets in PDB entry 7Q3S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 70first strand
Strand 2
A
36 41parallel
Strand 3
A
8 12parallel
Strand 4
A
113 119parallel
Strand 5
A
136 140parallel
Strand 6
A
214 217parallel
Strand 7
A
245 247parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 172first strand
Strand 2
A
180 181anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 353first strand
Strand 2
A
315 320parallel
Strand 3
A
286 290parallel
Strand 4
A
367 372parallel
Strand 5
A
389 391parallel
Strand 6
A
412 414parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il