Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q3T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7Q3T entry

There are 6 chains in PDB entry 7Q3T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 0	PHE 345
B	GLY 0	PHE 345
C	GLY 0	PHE 345
D	GLY 0	PHE 345
E	GLY 0	PHE 345
F	GLY 0	PHE 345

There are 32 helices in PDB entry 7Q3T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	98	103	Right-handed alpha
Helix 2	AA2	A	104	106	Right-handed 310
Helix 3	AA3	A	136	141	Right-handed alpha
Helix 4	AA4	A	169	173	Right-handed 310
Helix 5	AA5	A	247	249	Right-handed 310
Helix 6	AA6	A	323	330	Right-handed alpha
Helix 7	AA7	B	98	103	Right-handed alpha
Helix 8	AA8	B	104	106	Right-handed 310
Helix 9	AA9	B	169	173	Right-handed 310
Helix 10	AB1	B	247	249	Right-handed 310
Helix 11	AB2	B	323	330	Right-handed alpha
Helix 12	AB3	C	98	103	Right-handed alpha
Helix 13	AB4	C	104	106	Right-handed 310
Helix 14	AB5	C	136	141	Right-handed alpha
Helix 15	AB6	C	169	173	Right-handed 310
Helix 16	AB7	C	247	249	Right-handed 310
Helix 17	AB8	C	323	330	Right-handed alpha
Helix 18	AB9	D	98	103	Right-handed alpha
Helix 19	AC1	D	104	106	Right-handed 310
Helix 20	AC2	D	136	141	Right-handed alpha
Helix 21	AC3	D	169	173	Right-handed 310
Helix 22	AC4	D	246	250	Right-handed 310
Helix 23	AC5	D	323	330	Right-handed alpha
Helix 24	AC6	E	98	103	Right-handed alpha
Helix 25	AC7	E	104	106	Right-handed 310
Helix 26	AC8	E	169	173	Right-handed 310
Helix 27	AC9	E	323	330	Right-handed alpha
Helix 28	AD1	F	98	103	Right-handed alpha
Helix 29	AD2	F	104	106	Right-handed 310
Helix 30	AD3	F	169	173	Right-handed 310
Helix 31	AD4	F	246	250	Right-handed 310
Helix 32	AD5	F	323	330	Right-handed alpha

There are 6 sheets in PDB entry 7Q3T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 19 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1	6	first strand
Strand 2	A	31	32	first strand
Strand 3	A	35	45	first strand
Strand 4	A	50	61	anti-parallel
Strand 5	A	72	83	anti-parallel
Strand 6	A	88	95	anti-parallel
Strand 7	A	126	135	anti-parallel
Strand 8	A	145	152	anti-parallel
Strand 9	A	177	187	anti-parallel
Strand 10	A	190	200	anti-parallel
Strand 11	A	216	228	anti-parallel
Strand 12	A	231	245	anti-parallel
Strand 13	A	251	264	anti-parallel
Strand 14	A	270	284	anti-parallel
Strand 15	A	289	306	anti-parallel
Strand 16	A	309	318	anti-parallel
Strand 17	A	336	345	anti-parallel
Strand 18	A	9	23	anti-parallel
Strand 19	A	31	32	anti-parallel

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There are 19 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1	6	first strand
Strand 2	B	31	32	first strand
Strand 3	B	35	45	first strand
Strand 4	B	50	61	anti-parallel
Strand 5	B	72	83	anti-parallel
Strand 6	B	87	95	anti-parallel
Strand 7	B	126	135	anti-parallel
Strand 8	B	145	152	anti-parallel
Strand 9	B	177	187	anti-parallel
Strand 10	B	190	200	anti-parallel
Strand 11	B	216	228	anti-parallel
Strand 12	B	231	245	anti-parallel
Strand 13	B	251	264	anti-parallel
Strand 14	B	270	284	anti-parallel
Strand 15	B	289	306	anti-parallel
Strand 16	B	309	318	anti-parallel
Strand 17	B	336	345	anti-parallel
Strand 18	B	9	24	anti-parallel
Strand 19	B	31	32	anti-parallel

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There are 19 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1	6	first strand
Strand 2	C	31	32	first strand
Strand 3	C	35	45	first strand
Strand 4	C	50	61	anti-parallel
Strand 5	C	72	83	anti-parallel
Strand 6	C	88	95	anti-parallel
Strand 7	C	126	135	anti-parallel
Strand 8	C	146	152	anti-parallel
Strand 9	C	177	187	anti-parallel
Strand 10	C	190	200	anti-parallel
Strand 11	C	216	228	anti-parallel
Strand 12	C	231	245	anti-parallel
Strand 13	C	251	264	anti-parallel
Strand 14	C	270	284	anti-parallel
Strand 15	C	289	306	anti-parallel
Strand 16	C	309	318	anti-parallel
Strand 17	C	336	345	anti-parallel
Strand 18	C	9	24	anti-parallel
Strand 19	C	31	32	anti-parallel

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There are 19 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1	6	first strand
Strand 2	D	31	32	first strand
Strand 3	D	35	45	first strand
Strand 4	D	50	61	anti-parallel
Strand 5	D	72	83	anti-parallel
Strand 6	D	88	95	anti-parallel
Strand 7	D	126	135	anti-parallel
Strand 8	D	145	152	anti-parallel
Strand 9	D	177	186	anti-parallel
Strand 10	D	190	200	anti-parallel
Strand 11	D	216	228	anti-parallel
Strand 12	D	231	241	anti-parallel
Strand 13	D	254	264	anti-parallel
Strand 14	D	270	284	anti-parallel
Strand 15	D	289	306	anti-parallel
Strand 16	D	309	318	anti-parallel
Strand 17	D	336	345	anti-parallel
Strand 18	D	9	24	anti-parallel
Strand 19	D	31	32	anti-parallel

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There are 19 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1	6	first strand
Strand 2	E	31	32	first strand
Strand 3	E	35	47	first strand
Strand 4	E	50	61	anti-parallel
Strand 5	E	72	83	anti-parallel
Strand 6	E	88	95	anti-parallel
Strand 7	E	126	135	anti-parallel
Strand 8	E	146	152	anti-parallel
Strand 9	E	177	187	anti-parallel
Strand 10	E	190	200	anti-parallel
Strand 11	E	216	228	anti-parallel
Strand 12	E	231	245	anti-parallel
Strand 13	E	251	264	anti-parallel
Strand 14	E	270	284	anti-parallel
Strand 15	E	289	306	anti-parallel
Strand 16	E	309	318	anti-parallel
Strand 17	E	336	345	anti-parallel
Strand 18	E	9	24	anti-parallel
Strand 19	E	31	32	anti-parallel

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There are 19 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1	6	first strand
Strand 2	F	31	32	first strand
Strand 3	F	35	45	first strand
Strand 4	F	50	61	anti-parallel
Strand 5	F	72	83	anti-parallel
Strand 6	F	88	95	anti-parallel
Strand 7	F	126	135	anti-parallel
Strand 8	F	145	152	anti-parallel
Strand 9	F	177	185	anti-parallel
Strand 10	F	190	200	anti-parallel
Strand 11	F	216	228	anti-parallel
Strand 12	F	231	241	anti-parallel
Strand 13	F	254	264	anti-parallel
Strand 14	F	270	284	anti-parallel
Strand 15	F	289	306	anti-parallel
Strand 16	F	309	318	anti-parallel
Strand 17	F	336	344	anti-parallel
Strand 18	F	9	24	anti-parallel
Strand 19	F	31	32	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7Q3T

Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q3T