Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q4V

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7Q4V entry

There are 6 chains in PDB entry 7Q4V (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	VAL 583
B	MET 1	ALA 599
C	MET 1	TYR 156
E	MET 1	VAL 583
F	ASN 130	ALA 599
G	MET 1	ILE 136

There are128 helices in PDB entry 7Q4V. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	28	Right-handed alpha
Helix 2	AA2	A	78	94	Right-handed alpha
Helix 3	AA3	A	109	119	Right-handed alpha
Helix 4	AA4	A	152	160	Right-handed alpha
Helix 5	AA5	A	172	176	Right-handed 310
Helix 6	AA6	A	180	184	Right-handed 310
Helix 7	AA7	A	185	189	Right-handed 310
Helix 8	AA8	A	195	201	Right-handed alpha
Helix 9	AA9	A	211	221	Right-handed alpha
Helix 10	AB1	A	238	243	Right-handed 310
Helix 11	AB2	A	250	260	Right-handed alpha
Helix 12	AB3	A	269	291	Right-handed alpha
Helix 13	AB4	A	301	311	Right-handed alpha
Helix 14	AB5	A	312	319	Right-handed 310
Helix 15	AB6	A	324	342	Right-handed alpha
Helix 16	AB7	A	357	363	Right-handed alpha
Helix 17	AB8	A	381	393	Right-handed alpha
Helix 18	AB9	A	395	399	Right-handed 310
Helix 19	AC1	A	412	417	Right-handed alpha
Helix 20	AC2	A	422	437	Right-handed alpha
Helix 21	AC3	A	475	489	Right-handed alpha
Helix 22	AC4	A	505	509	Right-handed 310
Helix 23	AC5	A	516	523	Right-handed alpha
Helix 24	AC6	A	524	539	Right-handed alpha
Helix 25	AC7	A	549	559	Right-handed alpha
Helix 26	AC8	A	565	572	Right-handed alpha
Helix 27	AC9	B	13	19	Right-handed alpha
Helix 28	AD1	B	20	35	Right-handed alpha
Helix 29	AD2	B	71	73	Right-handed 310
Helix 30	AD3	B	74	82	Right-handed alpha
Helix 31	AD4	B	105	109	Right-handed 310
Helix 32	AD5	B	130	136	Right-handed alpha
Helix 33	AD6	B	141	147	Right-handed alpha
Helix 34	AD7	B	151	163	Right-handed alpha
Helix 35	AD8	B	173	183	Right-handed alpha
Helix 36	AD9	B	208	214	Right-handed alpha
Helix 37	AE1	B	214	230	Right-handed alpha
Helix 38	AE2	B	242	260	Right-handed alpha
Helix 39	AE3	B	283	288	Right-handed 310
Helix 40	AE4	B	292	297	Right-handed alpha
Helix 41	AE5	B	324	330	Right-handed alpha
Helix 42	AE6	B	330	338	Right-handed alpha
Helix 43	AE7	B	338	344	Right-handed alpha
Helix 44	AE8	B	375	382	Right-handed alpha
Helix 45	AE9	B	387	391	Right-handed 310
Helix 46	AF1	B	400	403	Right-handed 310
Helix 47	AF2	B	409	411	Right-handed 310
Helix 48	AF3	B	416	421	Right-handed alpha
Helix 49	AF4	B	442	456	Right-handed alpha
Helix 50	AF5	B	460	479	Right-handed alpha
Helix 51	AF6	B	485	499	Right-handed alpha
Helix 52	AF7	B	503	509	Right-handed alpha
Helix 53	AF8	B	510	518	Right-handed alpha
Helix 54	AF9	B	520	529	Right-handed alpha
Helix 55	AG1	B	538	542	Right-handed 310
Helix 56	AG2	B	555	560	Right-handed alpha
Helix 57	AG3	B	585	591	Right-handed alpha
Helix 58	AG4	C	10	20	Right-handed alpha
Helix 59	AG5	C	26	39	Right-handed alpha
Helix 60	AG6	C	42	54	Right-handed alpha
Helix 61	AG7	C	56	67	Right-handed alpha
Helix 62	AG8	C	85	90	Right-handed alpha
Helix 63	AG9	C	92	105	Right-handed alpha
Helix 64	AH1	C	127	131	Right-handed 310
Helix 65	AH2	C	148	154	Right-handed alpha
Helix 66	AH3	E	20	28	Right-handed alpha
Helix 67	AH4	E	78	94	Right-handed alpha
Helix 68	AH5	E	105	108	Right-handed 310
Helix 69	AH6	E	109	118	Right-handed alpha
Helix 70	AH7	E	152	160	Right-handed alpha
Helix 71	AH8	E	172	176	Right-handed 310
Helix 72	AH9	E	182	184	Right-handed 310
Helix 73	AI1	E	195	200	Right-handed alpha
Helix 74	AI2	E	212	221	Right-handed alpha
Helix 75	AI3	E	233	236	Right-handed 310
Helix 76	AI4	E	237	242	Right-handed alpha
Helix 77	AI5	E	250	261	Right-handed alpha
Helix 78	AI6	E	269	290	Right-handed alpha
Helix 79	AI7	E	301	312	Right-handed alpha
Helix 80	AI8	E	313	319	Right-handed 310
Helix 81	AI9	E	324	342	Right-handed alpha
Helix 82	AJ1	E	344	346	Right-handed 310
Helix 83	AJ2	E	358	365	Right-handed alpha
Helix 84	AJ3	E	381	393	Right-handed alpha
Helix 85	AJ4	E	395	399	Right-handed 310
Helix 86	AJ5	E	412	416	Right-handed 310
Helix 87	AJ6	E	422	437	Right-handed alpha
Helix 88	AJ7	E	475	488	Right-handed alpha
Helix 89	AJ8	E	505	509	Right-handed 310
Helix 90	AJ9	E	516	523	Right-handed alpha
Helix 91	AK1	E	524	539	Right-handed alpha
Helix 92	AK2	E	549	559	Right-handed alpha
Helix 93	AK3	E	565	572	Right-handed alpha
Helix 94	AK4	F	131	136	Right-handed alpha
Helix 95	AK5	F	140	147	Right-handed alpha
Helix 96	AK6	F	151	163	Right-handed alpha
Helix 97	AK7	F	173	184	Right-handed alpha
Helix 98	AK8	F	205	214	Right-handed alpha
Helix 99	AK9	F	215	230	Right-handed alpha
Helix 100	AL1	F	242	260	Right-handed alpha
Helix 101	AL2	F	283	287	Right-handed 310
Helix 102	AL3	F	288	298	Right-handed alpha
Helix 103	AL4	F	314	318	Right-handed 310
Helix 104	AL5	F	325	330	Right-handed alpha
Helix 105	AL6	F	330	338	Right-handed alpha
Helix 106	AL7	F	338	343	Right-handed alpha
Helix 107	AL8	F	375	382	Right-handed alpha
Helix 108	AL9	F	387	391	Right-handed 310
Helix 109	AM1	F	400	403	Right-handed 310
Helix 110	AM2	F	409	411	Right-handed 310
Helix 111	AM3	F	416	424	Right-handed alpha
Helix 112	AM4	F	440	454	Right-handed alpha
Helix 113	AM5	F	460	480	Right-handed alpha
Helix 114	AM6	F	488	500	Right-handed alpha
Helix 115	AM7	F	504	509	Right-handed alpha
Helix 116	AM8	F	510	520	Right-handed alpha
Helix 117	AM9	F	521	523	Right-handed 310
Helix 118	AN1	F	524	529	Right-handed alpha
Helix 119	AN2	F	538	542	Right-handed 310
Helix 120	AN3	F	555	561	Right-handed alpha
Helix 121	AN4	F	585	591	Right-handed alpha
Helix 122	AN5	G	5	16	Right-handed alpha
Helix 123	AN6	G	25	38	Right-handed alpha
Helix 124	AN7	G	45	54	Right-handed alpha
Helix 125	AN8	G	57	67	Right-handed alpha
Helix 126	AN9	G	85	92	Right-handed alpha
Helix 127	AO1	G	93	102	Right-handed alpha
Helix 128	AO2	G	127	131	Right-handed 310

There are 25 sheets in PDB entry 7Q4V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	16	first strand
Strand 2	A	3	8	anti-parallel
Strand 3	A	73	75	parallel
Strand 4	A	51	54	anti-parallel
Strand 5	A	61	62	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	143	first strand
Strand 2	A	206	208	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	168	170	first strand
Strand 2	A	177	179	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	268	first strand
Strand 2	A	225	230	parallel
Strand 3	A	348	353	parallel
Strand 4	A	378	380	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	296	297	first strand
Strand 2	A	496	500	parallel
Strand 3	A	467	474	parallel
Strand 4	A	455	461	anti-parallel
Strand 5	A	447	448	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	369	370	first strand
Strand 2	A	373	374	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	46	first strand
Strand 2	B	6	11	parallel
Strand 3	B	58	61	anti-parallel
Strand 4	B	65	67	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	193	first strand
Strand 2	B	233	239	parallel
Strand 3	B	274	280	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	367	371	first strand
Strand 2	B	353	360	anti-parallel
Strand 3	B	431	436	parallel
Strand 4	B	393	398	anti-parallel
Strand 5	B	405	407	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	544	546	first strand
Strand 2	B	596	598	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	566	567	first strand
Strand 2	B	575	576	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	117	119	first strand
Strand 2	C	78	82	parallel
Strand 3	C	134	136	anti-parallel
Strand 4	C	139	141	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	16	first strand
Strand 2	E	3	8	anti-parallel
Strand 3	E	73	75	parallel
Strand 4	E	51	54	anti-parallel
Strand 5	E	61	62	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	141	143	first strand
Strand 2	E	206	208	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	167	170	first strand
Strand 2	E	177	180	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	265	268	first strand
Strand 2	E	225	230	parallel
Strand 3	E	348	353	parallel
Strand 4	E	378	380	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	296	297	first strand
Strand 2	E	496	500	parallel
Strand 3	E	468	474	parallel
Strand 4	E	455	460	anti-parallel
Strand 5	E	447	448	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	369	370	first strand
Strand 2	E	373	374	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	194	196	first strand
Strand 2	F	322	324	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	233	239	first strand
Strand 2	F	274	280	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	353	357	first strand
Strand 2	F	367	371	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	404	407	first strand
Strand 2	F	395	398	anti-parallel
Strand 3	F	432	434	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	543	546	first strand
Strand 2	F	596	599	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	566	567	first strand
Strand 2	F	575	576	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	121	122	first strand
Strand 2	G	81	83	parallel
Strand 3	G	134	135	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7Q4V

Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q4V