Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q4W

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7Q4W entry

There are 6 chains in PDB entry 7Q4W (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	VAL 583
B	ASN 130	ALA 599
C	MET 1	GLY 129
E	MET 1	VAL 583
F	ASN 130	ALA 599
G	MET 1	GLY 129

There are122 helices in PDB entry 7Q4W. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	28	Right-handed alpha
Helix 2	AA2	A	78	94	Right-handed alpha
Helix 3	AA3	A	105	108	Right-handed 310
Helix 4	AA4	A	109	119	Right-handed alpha
Helix 5	AA5	A	152	160	Right-handed alpha
Helix 6	AA6	A	172	176	Right-handed 310
Helix 7	AA7	A	180	184	Right-handed 310
Helix 8	AA8	A	185	189	Right-handed 310
Helix 9	AA9	A	195	201	Right-handed alpha
Helix 10	AB1	A	211	220	Right-handed alpha
Helix 11	AB2	A	237	243	Right-handed 310
Helix 12	AB3	A	250	261	Right-handed alpha
Helix 13	AB4	A	269	291	Right-handed alpha
Helix 14	AB5	A	301	312	Right-handed alpha
Helix 15	AB6	A	313	319	Right-handed 310
Helix 16	AB7	A	324	342	Right-handed alpha
Helix 17	AB8	A	344	346	Right-handed 310
Helix 18	AB9	A	357	364	Right-handed alpha
Helix 19	AC1	A	381	393	Right-handed alpha
Helix 20	AC2	A	395	399	Right-handed 310
Helix 21	AC3	A	412	417	Right-handed alpha
Helix 22	AC4	A	422	438	Right-handed alpha
Helix 23	AC5	A	475	489	Right-handed alpha
Helix 24	AC6	A	505	509	Right-handed 310
Helix 25	AC7	A	517	523	Right-handed alpha
Helix 26	AC8	A	524	539	Right-handed alpha
Helix 27	AC9	A	549	559	Right-handed alpha
Helix 28	AD1	A	565	573	Right-handed alpha
Helix 29	AD2	B	131	136	Right-handed alpha
Helix 30	AD3	B	140	150	Right-handed alpha
Helix 31	AD4	B	151	163	Right-handed alpha
Helix 32	AD5	B	173	184	Right-handed alpha
Helix 33	AD6	B	205	214	Right-handed alpha
Helix 34	AD7	B	214	230	Right-handed alpha
Helix 35	AD8	B	242	260	Right-handed alpha
Helix 36	AD9	B	265	269	Right-handed 310
Helix 37	AE1	B	283	287	Right-handed 310
Helix 38	AE2	B	288	298	Right-handed alpha
Helix 39	AE3	B	314	318	Right-handed 310
Helix 40	AE4	B	325	330	Right-handed alpha
Helix 41	AE5	B	330	338	Right-handed alpha
Helix 42	AE6	B	338	344	Right-handed alpha
Helix 43	AE7	B	375	382	Right-handed alpha
Helix 44	AE8	B	387	391	Right-handed 310
Helix 45	AE9	B	400	403	Right-handed 310
Helix 46	AF1	B	409	411	Right-handed 310
Helix 47	AF2	B	416	423	Right-handed alpha
Helix 48	AF3	B	440	455	Right-handed alpha
Helix 49	AF4	B	460	479	Right-handed alpha
Helix 50	AF5	B	485	499	Right-handed alpha
Helix 51	AF6	B	503	508	Right-handed alpha
Helix 52	AF7	B	510	520	Right-handed alpha
Helix 53	AF8	B	520	529	Right-handed alpha
Helix 54	AF9	B	555	560	Right-handed alpha
Helix 55	AG1	B	585	591	Right-handed alpha
Helix 56	AG2	C	10	20	Right-handed alpha
Helix 57	AG3	C	25	39	Right-handed alpha
Helix 58	AG4	C	42	54	Right-handed alpha
Helix 59	AG5	C	56	67	Right-handed alpha
Helix 60	AG6	C	85	91	Right-handed alpha
Helix 61	AG7	C	92	105	Right-handed alpha
Helix 62	AG8	E	20	28	Right-handed alpha
Helix 63	AG9	E	78	93	Right-handed alpha
Helix 64	AH1	E	105	108	Right-handed 310
Helix 65	AH2	E	109	119	Right-handed alpha
Helix 66	AH3	E	152	160	Right-handed alpha
Helix 67	AH4	E	172	176	Right-handed 310
Helix 68	AH5	E	180	184	Right-handed 310
Helix 69	AH6	E	185	189	Right-handed 310
Helix 70	AH7	E	195	201	Right-handed alpha
Helix 71	AH8	E	211	220	Right-handed alpha
Helix 72	AH9	E	238	243	Right-handed 310
Helix 73	AI1	E	250	261	Right-handed alpha
Helix 74	AI2	E	269	291	Right-handed alpha
Helix 75	AI3	E	301	312	Right-handed alpha
Helix 76	AI4	E	313	319	Right-handed 310
Helix 77	AI5	E	324	342	Right-handed alpha
Helix 78	AI6	E	344	346	Right-handed 310
Helix 79	AI7	E	357	364	Right-handed alpha
Helix 80	AI8	E	381	393	Right-handed alpha
Helix 81	AI9	E	395	399	Right-handed 310
Helix 82	AJ1	E	412	417	Right-handed alpha
Helix 83	AJ2	E	422	438	Right-handed alpha
Helix 84	AJ3	E	475	489	Right-handed alpha
Helix 85	AJ4	E	505	509	Right-handed 310
Helix 86	AJ5	E	516	523	Right-handed alpha
Helix 87	AJ6	E	524	539	Right-handed alpha
Helix 88	AJ7	E	545	548	Right-handed 310
Helix 89	AJ8	E	549	559	Right-handed alpha
Helix 90	AJ9	E	565	573	Right-handed alpha
Helix 91	AK1	F	131	136	Right-handed alpha
Helix 92	AK2	F	140	150	Right-handed alpha
Helix 93	AK3	F	151	163	Right-handed alpha
Helix 94	AK4	F	173	184	Right-handed alpha
Helix 95	AK5	F	205	214	Right-handed alpha
Helix 96	AK6	F	214	230	Right-handed alpha
Helix 97	AK7	F	242	260	Right-handed alpha
Helix 98	AK8	F	265	269	Right-handed 310
Helix 99	AK9	F	283	287	Right-handed 310
Helix 100	AL1	F	288	298	Right-handed alpha
Helix 101	AL2	F	314	318	Right-handed 310
Helix 102	AL3	F	325	338	Right-handed alpha
Helix 103	AL4	F	338	344	Right-handed alpha
Helix 104	AL5	F	375	382	Right-handed alpha
Helix 105	AL6	F	387	391	Right-handed 310
Helix 106	AL7	F	400	403	Right-handed 310
Helix 107	AL8	F	409	411	Right-handed 310
Helix 108	AL9	F	416	424	Right-handed alpha
Helix 109	AM1	F	440	456	Right-handed alpha
Helix 110	AM2	F	460	479	Right-handed alpha
Helix 111	AM3	F	485	499	Right-handed alpha
Helix 112	AM4	F	503	509	Right-handed alpha
Helix 113	AM5	F	510	520	Right-handed alpha
Helix 114	AM6	F	521	529	Right-handed alpha
Helix 115	AM7	F	555	560	Right-handed alpha
Helix 116	AM8	F	585	591	Right-handed alpha
Helix 117	AM9	G	10	19	Right-handed alpha
Helix 118	AN1	G	25	39	Right-handed alpha
Helix 119	AN2	G	42	54	Right-handed alpha
Helix 120	AN3	G	56	67	Right-handed alpha
Helix 121	AN4	G	85	90	Right-handed alpha
Helix 122	AN5	G	92	105	Right-handed alpha

There are 22 sheets in PDB entry 7Q4W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	16	first strand
Strand 2	A	3	8	anti-parallel
Strand 3	A	73	75	parallel
Strand 4	A	51	54	anti-parallel
Strand 5	A	61	62	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	143	first strand
Strand 2	A	206	208	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	168	170	first strand
Strand 2	A	177	179	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	268	first strand
Strand 2	A	225	230	parallel
Strand 3	A	348	353	parallel
Strand 4	A	378	380	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	296	297	first strand
Strand 2	A	496	500	parallel
Strand 3	A	466	474	parallel
Strand 4	A	455	463	anti-parallel
Strand 5	A	447	448	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	369	370	first strand
Strand 2	A	373	374	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	274	280	first strand
Strand 2	B	233	239	parallel
Strand 3	B	192	196	parallel
Strand 4	B	320	324	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	366	371	first strand
Strand 2	B	353	360	anti-parallel
Strand 3	B	431	436	parallel
Strand 4	B	393	398	anti-parallel
Strand 5	B	404	407	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	543	546	first strand
Strand 2	B	596	599	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	566	567	first strand
Strand 2	B	575	576	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	78	81	first strand
Strand 2	C	117	120	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	16	first strand
Strand 2	E	3	8	anti-parallel
Strand 3	E	73	75	parallel
Strand 4	E	51	54	anti-parallel
Strand 5	E	61	62	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	141	143	first strand
Strand 2	E	206	208	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	168	170	first strand
Strand 2	E	177	179	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	265	268	first strand
Strand 2	E	225	230	parallel
Strand 3	E	348	353	parallel
Strand 4	E	378	380	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	296	297	first strand
Strand 2	E	496	500	parallel
Strand 3	E	466	474	parallel
Strand 4	E	455	463	anti-parallel
Strand 5	E	447	448	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	369	370	first strand
Strand 2	E	373	374	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	277	280	first strand
Strand 2	F	233	239	parallel
Strand 3	F	192	196	parallel
Strand 4	F	322	324	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	368	371	first strand
Strand 2	F	353	360	anti-parallel
Strand 3	F	431	436	parallel
Strand 4	F	393	398	anti-parallel
Strand 5	F	404	407	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	543	546	first strand
Strand 2	F	596	599	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	566	567	first strand
Strand 2	F	575	576	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	78	83	first strand
Strand 2	G	117	122	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7Q4W

Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q4W