Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q4Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Q4Y entry

There are 2 chains in PDB entry 7Q4Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 116HIS 292
B
 GLY 116ALA 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 7Q4Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
2
A
195 203Right-handed alpha
Helix 2
3
A
206 211Right-handed 310
Helix 3
4
A
222 227Right-handed alpha
Helix 4
6
B
195 203Right-handed alpha
Helix 5
7
B
206 211Right-handed 310
Helix 6
8
B
222 227Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7Q4Y. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 144first strand
Strand 2
A
127 133first strand
Strand 3
A
282 288first strand
Strand 4
A
268 274first strand
Strand 5
A
257 263first strand
Strand 6
A
230 240first strand
Strand 7
A
170 179first strand
Strand 8
A
154 162first strand
Strand 9
A
141 146first strand
Back to list of sheets
Back to top of page

There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 144first strand
Strand 2
B
127 133first strand
Strand 3
B
282 288first strand
Strand 4
B
268 274first strand
Strand 5
B
257 263first strand
Strand 6
B
230 240first strand
Strand 7
B
171 179first strand
Strand 8
B
154 161first strand
Strand 9
B
141 146first strand
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il