Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q60


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Q60 entry

There is 1 chain in PDB entry 7Q60 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 19PRO 1321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 7Q60. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
176 178Right-handed 310
Helix 2
AA2
A
596 602Right-handed alpha
Helix 3
AA3
A
608 615Right-handed alpha
Helix 4
AA4
A
670 677Right-handed alpha
Helix 5
AA5
A
880 884Right-handed 310
Helix 6
AA6
A
956 962Right-handed alpha
Helix 7
AA7
A
963 965Right-handed 310
Helix 8
AA8
A
972 979Right-handed alpha
Helix 9
AA9
A
979 990Right-handed alpha
Helix 10
AB1
A
995 1015Right-handed alpha
Helix 11
AB2
A
1034 1047Right-handed alpha
Helix 12
AB3
A
1056 1067Right-handed alpha
Helix 13
AB4
A
1093 1102Right-handed alpha
Helix 14
AB5
A
1103 1107Right-handed 310
Helix 15
AB6
A
1115 1122Right-handed alpha
Helix 16
AB7
A
1132 1146Right-handed alpha
Helix 17
AB8
A
1155 1159Right-handed 310
Helix 18
AB9
A
1192 1205Right-handed alpha
Helix 19
AC1
A
1211 1227Right-handed alpha
Helix 20
AC2
A
1240 1255Right-handed alpha
Back to top of page

There are 18 sheets in PDB entry 7Q60. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 82first strand
Strand 2
A
36 43anti-parallel
Strand 3
A
23 28anti-parallel
Strand 4
A
680 684anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 31first strand
Strand 2
A
107 115parallel
Strand 3
A
92 101anti-parallel
Strand 4
A
51 57anti-parallel
Strand 5
A
62 68anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 126first strand
Strand 2
A
136 144anti-parallel
Strand 3
A
180 186anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
205 211parallel
Strand 3
A
194 200anti-parallel
Strand 4
A
155 161anti-parallel
Strand 5
A
167 174anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 223first strand
Strand 2
A
235 244anti-parallel
Strand 3
A
291 297anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 230first strand
Strand 2
A
326 336parallel
Strand 3
A
311 320anti-parallel
Strand 4
A
252 260anti-parallel
Strand 5
A
279 285anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 346first strand
Strand 2
A
356 364anti-parallel
Strand 3
A
398 404anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
350 351first strand
Strand 2
A
438 444parallel
Strand 3
A
413 418anti-parallel
Strand 4
A
375 381anti-parallel
Strand 5
A
386 392anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
452 456first strand
Strand 2
A
467 475anti-parallel
Strand 3
A
516 523anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 507first strand
Strand 2
A
487 494anti-parallel
Strand 3
A
533 539anti-parallel
Strand 4
A
545 551anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
563 567first strand
Strand 2
A
576 582anti-parallel
Strand 3
A
749 755anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
570 571first strand
Strand 2
A
782 786parallel
Strand 3
A
761 770anti-parallel
Strand 4
A
588 595anti-parallel
Strand 5
A
741 743anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
736 738first strand
Strand 2
A
588 595anti-parallel
Strand 3
A
761 770anti-parallel
Strand 4
A
776 778anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
729 730first strand
Strand 2
A
895 904parallel
Strand 3
A
799 801parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
729 730first strand
Strand 2
A
895 904parallel
Strand 3
A
864 874anti-parallel
Strand 4
A
820 826anti-parallel
Strand 5
A
842 846anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
790 795first strand
Strand 2
A
805 814anti-parallel
Strand 3
A
850 860anti-parallel
Strand 4
A
832 834anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
908 918first strand
Strand 2
A
1308 1318anti-parallel
Strand 3
A
943 949anti-parallel
Strand 4
A
1286 1290anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
925 930first strand
Strand 2
A
1297 1305anti-parallel
Strand 3
A
1261 1267anti-parallel
Strand 4
A
1273 1278anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il