Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q61


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Q61 entry

There is 1 chain in PDB entry 7Q61 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 19PRO 1320
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7Q61. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
508 512Right-handed 310
Helix 2
AA2
A
596 602Right-handed alpha
Helix 3
AA3
A
608 615Right-handed alpha
Helix 4
AA4
A
670 677Right-handed alpha
Helix 5
AA5
A
837 839Right-handed 310
Helix 6
AA6
A
970 973Right-handed 310
Helix 7
AA7
A
974 990Right-handed alpha
Helix 8
AA8
A
995 1011Right-handed alpha
Helix 9
AA9
A
1034 1046Right-handed alpha
Helix 10
AB1
A
1047 1051Right-handed 310
Helix 11
AB2
A
1056 1070Right-handed alpha
Helix 12
AB3
A
1093 1106Right-handed alpha
Helix 13
AB4
A
1114 1125Right-handed alpha
Helix 14
AB5
A
1126 1131Right-handed alpha
Helix 15
AB6
A
1134 1144Right-handed alpha
Helix 16
AB7
A
1192 1205Right-handed alpha
Helix 17
AB8
A
1211 1226Right-handed alpha
Helix 18
AB9
A
1239 1255Right-handed alpha
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There are 19 sheets in PDB entry 7Q61. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 82first strand
Strand 2
A
36 42anti-parallel
Strand 3
A
24 28anti-parallel
Strand 4
A
680 684anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 32first strand
Strand 2
A
105 116parallel
Strand 3
A
91 102anti-parallel
Strand 4
A
51 57anti-parallel
Strand 5
A
62 69anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 126first strand
Strand 2
A
136 144anti-parallel
Strand 3
A
180 186anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
205 211parallel
Strand 3
A
194 200anti-parallel
Strand 4
A
155 161anti-parallel
Strand 5
A
167 174anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 223first strand
Strand 2
A
235 244anti-parallel
Strand 3
A
291 297anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 230first strand
Strand 2
A
326 336parallel
Strand 3
A
308 320anti-parallel
Strand 4
A
252 262anti-parallel
Strand 5
A
278 285anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
398 403first strand
Strand 2
A
357 364anti-parallel
Strand 3
A
338 347anti-parallel
Strand 4
A
434 436parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
350 351first strand
Strand 2
A
438 444parallel
Strand 3
A
413 418anti-parallel
Strand 4
A
375 381anti-parallel
Strand 5
A
388 392anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
452 455first strand
Strand 2
A
467 475anti-parallel
Strand 3
A
516 523anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
498 507first strand
Strand 2
A
487 495anti-parallel
Strand 3
A
533 539anti-parallel
Strand 4
A
545 551anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
563 567first strand
Strand 2
A
576 582anti-parallel
Strand 3
A
749 755anti-parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
570 571first strand
Strand 2
A
782 786parallel
Strand 3
A
761 771anti-parallel
Strand 4
A
588 595anti-parallel
Strand 5
A
736 743anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
570 571first strand
Strand 2
A
782 786parallel
Strand 3
A
761 771anti-parallel
Strand 4
A
775 778anti-parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
729 730first strand
Strand 2
A
894 904parallel
Strand 3
A
799 801parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
729 730first strand
Strand 2
A
894 904parallel
Strand 3
A
864 874anti-parallel
Strand 4
A
820 826anti-parallel
Strand 5
A
841 846anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
790 795first strand
Strand 2
A
805 814anti-parallel
Strand 3
A
850 860anti-parallel
Strand 4
A
832 834anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
908 918first strand
Strand 2
A
1308 1318anti-parallel
Strand 3
A
943 949anti-parallel
Strand 4
A
1287 1290anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
921 930first strand
Strand 2
A
1297 1305anti-parallel
Strand 3
A
1261 1268anti-parallel
Strand 4
A
1274 1278anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1165 1166first strand
Strand 2
A
1171 1172anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il