Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q6F

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7Q6F entry

There are 2 chains in PDB entry 7Q6F (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 8	SER 389
B	ASN 8	SER 389

There are 30 helices in PDB entry 7Q6F. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	53	71	Right-handed alpha
Helix 2	AA2	A	100	103	Right-handed 310
Helix 3	AA3	A	105	118	Right-handed alpha
Helix 4	AA4	A	165	177	Right-handed alpha
Helix 5	AA5	A	188	194	Right-handed alpha
Helix 6	AA6	A	198	205	Right-handed alpha
Helix 7	AA7	A	235	248	Right-handed alpha
Helix 8	AA8	A	250	260	Right-handed alpha
Helix 9	AA9	A	265	269	Right-handed 310
Helix 10	AB1	A	290	320	Right-handed alpha
Helix 11	AB2	A	321	323	Right-handed 310
Helix 12	AB3	A	336	341	Right-handed 310
Helix 13	AB4	A	343	350	Right-handed alpha
Helix 14	AB5	A	373	375	Right-handed 310
Helix 15	AB6	A	376	388	Right-handed alpha
Helix 16	AB7	B	53	71	Right-handed alpha
Helix 17	AB8	B	100	103	Right-handed 310
Helix 18	AB9	B	105	118	Right-handed alpha
Helix 19	AC1	B	165	177	Right-handed alpha
Helix 20	AC2	B	188	194	Right-handed alpha
Helix 21	AC3	B	198	205	Right-handed alpha
Helix 22	AC4	B	235	248	Right-handed alpha
Helix 23	AC5	B	250	260	Right-handed alpha
Helix 24	AC6	B	265	269	Right-handed 310
Helix 25	AC7	B	290	320	Right-handed alpha
Helix 26	AC8	B	321	323	Right-handed 310
Helix 27	AC9	B	336	341	Right-handed 310
Helix 28	AD1	B	343	350	Right-handed alpha
Helix 29	AD2	B	373	375	Right-handed 310
Helix 30	AD3	B	376	388	Right-handed alpha

There are 10 sheets in PDB entry 7Q6F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	42	first strand
Strand 2	A	19	27	anti-parallel
Strand 3	A	9	15	anti-parallel
Strand 4	A	78	83	parallel
Strand 5	A	181	187	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	47	first strand
Strand 2	A	50	51	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	89	98	first strand
Strand 2	A	153	164	anti-parallel
Strand 3	A	125	137	anti-parallel
Strand 4	A	140	143	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	226	232	first strand
Strand 2	A	216	221	anti-parallel
Strand 3	A	206	211	anti-parallel
Strand 4	A	332	335	parallel
Strand 5	A	356	358	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	274	276	first strand
Strand 2	A	287	289	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	42	first strand
Strand 2	B	19	27	anti-parallel
Strand 3	B	9	15	anti-parallel
Strand 4	B	78	83	parallel
Strand 5	B	181	187	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	47	first strand
Strand 2	B	50	51	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	89	98	first strand
Strand 2	B	153	164	anti-parallel
Strand 3	B	125	137	anti-parallel
Strand 4	B	141	143	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	226	232	first strand
Strand 2	B	216	221	anti-parallel
Strand 3	B	206	211	anti-parallel
Strand 4	B	332	335	parallel
Strand 5	B	356	358	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	274	277	first strand
Strand 2	B	286	289	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7Q6F

Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q6F