Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q6O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Q6O entry

There are 2 chains in PDB entry 7Q6O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR -8GLY 199
B
 MET 1LYS 198
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7Q6O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 28Right-handed alpha
Helix 2
AA2
A
44 51Right-handed alpha
Helix 3
AA3
A
63 70Right-handed 310
Helix 4
AA4
A
85 94Right-handed alpha
Helix 5
AA5
A
95 101Right-handed alpha
Helix 6
AA6
A
120 135Right-handed alpha
Helix 7
AA7
A
146 151Right-handed 310
Helix 8
AA8
A
176 199Right-handed alpha
Helix 9
AA9
B
13 27Right-handed alpha
Helix 10
AB1
B
44 51Right-handed alpha
Helix 11
AB2
B
63 70Right-handed 310
Helix 12
AB3
B
85 94Right-handed alpha
Helix 13
AB4
B
95 102Right-handed alpha
Helix 14
AB5
B
120 135Right-handed alpha
Helix 15
AB6
B
146 150Right-handed 310
Helix 16
AB7
B
176 198Right-handed alpha
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There are 4 sheets in PDB entry 7Q6O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 38first strand
Strand 2
A
2 8parallel
Strand 3
A
72 80parallel
Strand 4
A
108 115parallel
Strand 5
A
138 139parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
A
72 80anti-parallel
Strand 3
A
108 115parallel
Strand 4
A
164 166parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 38first strand
Strand 2
B
2 8parallel
Strand 3
B
72 80parallel
Strand 4
B
108 115parallel
Strand 5
B
138 139parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 84first strand
Strand 2
B
72 80anti-parallel
Strand 3
B
108 115parallel
Strand 4
B
164 166parallel
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