Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q6Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Q6Z entry

There are 2 chains in PDB entry 7Q6Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 493
B
 GLN 24SER 913
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 7Q6Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 32Right-handed alpha
Helix 2
AA2
A
32 41Right-handed alpha
Helix 3
AA3
A
58 70Right-handed alpha
Helix 4
AA4
A
70 89Right-handed alpha
Helix 5
AA5
A
92 110Right-handed alpha
Helix 6
AA6
A
110 130Right-handed alpha
Helix 7
AA7
A
132 149Right-handed alpha
Helix 8
AA8
A
149 160Right-handed alpha
Helix 9
AA9
A
162 188Right-handed alpha
Helix 10
AB1
A
200 209Right-handed alpha
Helix 11
AB2
A
210 214Right-handed 310
Helix 12
AB3
A
221 230Right-handed alpha
Helix 13
AB4
A
236 265Right-handed alpha
Helix 14
AB5
A
266 273Right-handed alpha
Helix 15
AB6
A
273 278Right-handed alpha
Helix 16
AB7
A
281 314Right-handed alpha
Helix 17
AB8
A
330 337Right-handed alpha
Helix 18
AB9
A
339 349Right-handed alpha
Helix 19
AC1
A
350 355Right-handed alpha
Helix 20
AC2
A
359 380Right-handed alpha
Helix 21
AC3
A
382 408Right-handed alpha
Helix 22
AC4
A
408 419Right-handed alpha
Helix 23
AC5
A
420 449Right-handed alpha
Helix 24
AC6
A
449 461Right-handed alpha
Helix 25
AC7
A
467 488Right-handed alpha
Helix 26
AC8
B
855 858Right-handed 310
Helix 27
AC9
B
880 884Right-handed 310
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There are 4 sheets in PDB entry 7Q6Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 44first strand
Strand 2
A
52 53anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 30first strand
Strand 2
B
812 819anti-parallel
Strand 3
B
871 876anti-parallel
Strand 4
B
862 866anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
851 853first strand
Strand 2
B
840 845anti-parallel
Strand 3
B
827 833anti-parallel
Strand 4
B
885 892anti-parallel
Strand 5
B
902 904anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
851 853first strand
Strand 2
B
840 845anti-parallel
Strand 3
B
827 833anti-parallel
Strand 4
B
885 892anti-parallel
Strand 5
B
908 910anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il