Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q72


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7Q72 entry

There are 4 chains in PDB entry 7Q72 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 11ALA 551
C
 ILE 288GLY 322
B
 GLN 14ALA 551
D
 TRP 298GLU 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 7Q72. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 44Right-handed alpha
Helix 2
AA2
A
49 78Right-handed alpha
Helix 3
AA3
A
81 88Right-handed alpha
Helix 4
AA4
A
120 127Right-handed alpha
Helix 5
AA5
A
127 135Right-handed alpha
Helix 6
AA6
A
181 186Right-handed 310
Helix 7
AA7
A
189 208Right-handed alpha
Helix 8
AA8
A
211 229Right-handed alpha
Helix 9
AA9
A
240 255Right-handed alpha
Helix 10
AB1
A
259 273Right-handed alpha
Helix 11
AB2
A
300 305Right-handed alpha
Helix 12
AB3
A
325 347Right-handed alpha
Helix 13
AB4
A
352 356Right-handed 310
Helix 14
AB5
A
361 365Right-handed 310
Helix 15
AB6
A
378 392Right-handed alpha
Helix 16
AB7
A
393 402Right-handed alpha
Helix 17
AB8
A
424 432Right-handed alpha
Helix 18
AB9
A
503 516Right-handed alpha
Helix 19
AC1
A
538 542Right-handed 310
Helix 20
AC2
C
289 300Right-handed alpha
Helix 21
AC3
B
27 44Right-handed alpha
Helix 22
AC4
B
49 78Right-handed alpha
Helix 23
AC5
B
83 88Right-handed 310
Helix 24
AC6
B
120 127Right-handed alpha
Helix 25
AC7
B
128 136Right-handed alpha
Helix 26
AC8
B
181 186Right-handed 310
Helix 27
AC9
B
189 208Right-handed alpha
Helix 28
AD1
B
211 229Right-handed alpha
Helix 29
AD2
B
240 255Right-handed alpha
Helix 30
AD3
B
259 273Right-handed alpha
Helix 31
AD4
B
300 305Right-handed alpha
Helix 32
AD5
B
325 347Right-handed alpha
Helix 33
AD6
B
352 356Right-handed 310
Helix 34
AD7
B
361 366Right-handed alpha
Helix 35
AD8
B
378 392Right-handed alpha
Helix 36
AD9
B
393 403Right-handed alpha
Helix 37
AE1
B
424 432Right-handed alpha
Helix 38
AE2
B
503 516Right-handed alpha
Helix 39
AE3
B
535 537Right-handed 310
Helix 40
AE4
B
538 542Right-handed 310
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There are 8 sheets in PDB entry 7Q72. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 95first strand
Strand 2
A
109 116anti-parallel
Strand 3
A
159 168parallel
Strand 4
A
151 156anti-parallel
Strand 5
A
138 142anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
406 411first strand
Strand 2
A
486 490anti-parallel
Strand 3
A
368 376anti-parallel
Strand 4
A
478 484anti-parallel
Strand 5
A
416 421anti-parallel
Strand 6
A
441 443anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
406 411first strand
Strand 2
A
486 490anti-parallel
Strand 3
A
368 376anti-parallel
Strand 4
A
525 533anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
500 502first strand
Strand 2
C
312 314anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 95first strand
Strand 2
B
109 115anti-parallel
Strand 3
B
159 167parallel
Strand 4
B
151 156anti-parallel
Strand 5
B
138 144anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
409 411first strand
Strand 2
B
478 488anti-parallel
Strand 3
B
416 421anti-parallel
Strand 4
B
442 444anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
409 411first strand
Strand 2
B
478 488anti-parallel
Strand 3
B
368 376anti-parallel
Strand 4
B
525 533anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
500 502first strand
Strand 2
D
312 314anti-parallel
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