Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q97

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7Q97 entry

There are 2 chains in PDB entry 7Q97 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 268	ALA 1461
B	LYS 268	ALA 1461

There are 18 helices in PDB entry 7Q97. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	290	299	Right-handed alpha
Helix 2	AA2	A	317	319	Right-handed 310
Helix 3	AA3	A	354	357	Right-handed 310
Helix 4	AA4	A	706	708	Right-handed 310
Helix 5	AA5	A	1110	1115	Right-handed 310
Helix 6	AA6	A	1119	1123	Right-handed 310
Helix 7	AA7	A	1193	1195	Right-handed 310
Helix 8	AA8	A	1238	1242	Right-handed 310
Helix 9	AA9	A	1327	1331	Right-handed 310
Helix 10	AB1	B	290	299	Right-handed alpha
Helix 11	AB2	B	317	319	Right-handed 310
Helix 12	AB3	B	354	357	Right-handed 310
Helix 13	AB4	B	706	708	Right-handed 310
Helix 14	AB5	B	1110	1115	Right-handed 310
Helix 15	AB6	B	1119	1123	Right-handed 310
Helix 16	AB7	B	1193	1195	Right-handed 310
Helix 17	AB8	B	1238	1242	Right-handed 310
Helix 18	AB9	B	1327	1331	Right-handed 310

There are 16 sheets in PDB entry 7Q97. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	300	301	first strand
Strand 2	A	306	307	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	321	325	first strand
Strand 2	A	331	334	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	336	337	first strand
Strand 2	A	352	353	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	381	385	first strand
Strand 2	A	372	375	anti-parallel
Strand 3	A	359	362	anti-parallel
Strand 4	A	428	438	anti-parallel
Strand 5	A	419	425	anti-parallel
Strand 6	A	409	414	anti-parallel
Strand 7	A	401	406	anti-parallel

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There are 63 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	381	385	first strand
Strand 2	A	372	375	anti-parallel
Strand 3	A	359	362	anti-parallel
Strand 4	A	428	438	anti-parallel
Strand 5	A	444	450	anti-parallel
Strand 6	A	454	459	anti-parallel
Strand 7	A	465	471	anti-parallel
Strand 8	A	479	485	anti-parallel
Strand 9	A	491	499	anti-parallel
Strand 10	A	505	510	anti-parallel
Strand 11	A	515	521	anti-parallel
Strand 12	A	527	531	anti-parallel
Strand 13	A	537	544	anti-parallel
Strand 14	A	550	557	anti-parallel
Strand 15	A	562	568	anti-parallel
Strand 16	A	573	578	anti-parallel
Strand 17	A	583	588	anti-parallel
Strand 18	A	594	598	anti-parallel
Strand 19	A	604	610	anti-parallel
Strand 20	A	614	619	anti-parallel
Strand 21	A	625	630	anti-parallel
Strand 22	A	636	640	anti-parallel
Strand 23	A	646	651	anti-parallel
Strand 24	A	658	662	anti-parallel
Strand 25	A	668	673	anti-parallel
Strand 26	A	679	683	anti-parallel
Strand 27	A	689	694	anti-parallel
Strand 28	A	700	704	anti-parallel
Strand 29	A	710	715	anti-parallel
Strand 30	A	721	725	anti-parallel
Strand 31	A	731	736	anti-parallel
Strand 32	A	742	746	anti-parallel
Strand 33	A	752	757	anti-parallel
Strand 34	A	763	767	anti-parallel
Strand 35	A	773	778	anti-parallel
Strand 36	A	784	788	anti-parallel
Strand 37	A	794	799	anti-parallel
Strand 38	A	805	809	anti-parallel
Strand 39	A	815	820	anti-parallel
Strand 40	A	826	830	anti-parallel
Strand 41	A	836	841	anti-parallel
Strand 42	A	847	851	anti-parallel
Strand 43	A	857	862	anti-parallel
Strand 44	A	868	874	anti-parallel
Strand 45	A	893	899	anti-parallel
Strand 46	A	905	910	anti-parallel
Strand 47	A	913	919	anti-parallel
Strand 48	A	925	932	anti-parallel
Strand 49	A	937	944	anti-parallel
Strand 50	A	950	954	anti-parallel
Strand 51	A	959	964	anti-parallel
Strand 52	A	970	974	anti-parallel
Strand 53	A	980	984	anti-parallel
Strand 54	A	992	994	anti-parallel
Strand 55	A	1002	1006	anti-parallel
Strand 56	A	1012	1016	anti-parallel
Strand 57	A	1021	1026	anti-parallel
Strand 58	A	1032	1037	anti-parallel
Strand 59	A	1052	1056	anti-parallel
Strand 60	A	1062	1066	anti-parallel
Strand 61	A	1075	1080	anti-parallel
Strand 62	A	1086	1091	anti-parallel
Strand 63	A	1097	1099	anti-parallel

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There are 15 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1126	1127	first strand
Strand 2	A	1130	1134	anti-parallel
Strand 3	A	1140	1144	anti-parallel
Strand 4	A	1150	1155	anti-parallel
Strand 5	A	1161	1168	anti-parallel
Strand 6	A	1171	1179	anti-parallel
Strand 7	A	1185	1191	anti-parallel
Strand 8	A	1197	1205	anti-parallel
Strand 9	A	1210	1215	anti-parallel
Strand 10	A	1218	1224	anti-parallel
Strand 11	A	1231	1236	anti-parallel
Strand 12	A	1243	1249	anti-parallel
Strand 13	A	1255	1259	anti-parallel
Strand 14	A	1265	1271	anti-parallel
Strand 15	A	1278	1282	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1313	1314	first strand
Strand 2	A	1319	1320	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1344	1345	first strand
Strand 2	A	1421	1422	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	300	301	first strand
Strand 2	B	306	307	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	321	325	first strand
Strand 2	B	331	334	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	336	337	first strand
Strand 2	B	352	353	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	381	385	first strand
Strand 2	B	372	375	anti-parallel
Strand 3	B	359	362	anti-parallel
Strand 4	B	428	438	anti-parallel
Strand 5	B	419	425	anti-parallel
Strand 6	B	409	414	anti-parallel
Strand 7	B	401	406	anti-parallel

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There are 63 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	381	385	first strand
Strand 2	B	372	375	anti-parallel
Strand 3	B	359	362	anti-parallel
Strand 4	B	428	438	anti-parallel
Strand 5	B	444	450	anti-parallel
Strand 6	B	454	459	anti-parallel
Strand 7	B	465	471	anti-parallel
Strand 8	B	479	485	anti-parallel
Strand 9	B	491	499	anti-parallel
Strand 10	B	505	510	anti-parallel
Strand 11	B	515	521	anti-parallel
Strand 12	B	527	531	anti-parallel
Strand 13	B	537	544	anti-parallel
Strand 14	B	550	557	anti-parallel
Strand 15	B	562	568	anti-parallel
Strand 16	B	573	578	anti-parallel
Strand 17	B	583	588	anti-parallel
Strand 18	B	594	598	anti-parallel
Strand 19	B	604	610	anti-parallel
Strand 20	B	614	619	anti-parallel
Strand 21	B	625	630	anti-parallel
Strand 22	B	636	640	anti-parallel
Strand 23	B	646	651	anti-parallel
Strand 24	B	658	662	anti-parallel
Strand 25	B	668	673	anti-parallel
Strand 26	B	679	683	anti-parallel
Strand 27	B	689	694	anti-parallel
Strand 28	B	700	704	anti-parallel
Strand 29	B	710	715	anti-parallel
Strand 30	B	721	725	anti-parallel
Strand 31	B	731	736	anti-parallel
Strand 32	B	742	746	anti-parallel
Strand 33	B	752	757	anti-parallel
Strand 34	B	763	767	anti-parallel
Strand 35	B	773	778	anti-parallel
Strand 36	B	784	788	anti-parallel
Strand 37	B	794	799	anti-parallel
Strand 38	B	805	809	anti-parallel
Strand 39	B	815	820	anti-parallel
Strand 40	B	826	830	anti-parallel
Strand 41	B	836	841	anti-parallel
Strand 42	B	847	851	anti-parallel
Strand 43	B	857	862	anti-parallel
Strand 44	B	868	874	anti-parallel
Strand 45	B	893	899	anti-parallel
Strand 46	B	905	910	anti-parallel
Strand 47	B	913	919	anti-parallel
Strand 48	B	925	932	anti-parallel
Strand 49	B	937	944	anti-parallel
Strand 50	B	950	954	anti-parallel
Strand 51	B	959	964	anti-parallel
Strand 52	B	970	974	anti-parallel
Strand 53	B	980	984	anti-parallel
Strand 54	B	992	994	anti-parallel
Strand 55	B	1002	1006	anti-parallel
Strand 56	B	1012	1016	anti-parallel
Strand 57	B	1021	1026	anti-parallel
Strand 58	B	1032	1037	anti-parallel
Strand 59	B	1052	1056	anti-parallel
Strand 60	B	1062	1066	anti-parallel
Strand 61	B	1075	1080	anti-parallel
Strand 62	B	1086	1091	anti-parallel
Strand 63	B	1097	1099	anti-parallel

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There are 15 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1126	1127	first strand
Strand 2	B	1130	1134	anti-parallel
Strand 3	B	1140	1144	anti-parallel
Strand 4	B	1150	1155	anti-parallel
Strand 5	B	1161	1168	anti-parallel
Strand 6	B	1171	1179	anti-parallel
Strand 7	B	1185	1191	anti-parallel
Strand 8	B	1197	1205	anti-parallel
Strand 9	B	1210	1215	anti-parallel
Strand 10	B	1218	1224	anti-parallel
Strand 11	B	1231	1236	anti-parallel
Strand 12	B	1243	1249	anti-parallel
Strand 13	B	1255	1259	anti-parallel
Strand 14	B	1265	1271	anti-parallel
Strand 15	B	1278	1282	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1313	1314	first strand
Strand 2	B	1319	1320	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1344	1345	first strand
Strand 2	B	1421	1422	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7Q97

Analysis of interatomic Contacts of Structural Units in PDB entry:
7Q97