Analysis of interatomic Contacts of Structural Units in PDB entry:
7QAZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QAZ entry

There are 4 chains in PDB entry 7QAZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 110ASN 327
B
 GLY 110GLU 328
C
 PRO 111GLU 328
D
 A 1 A 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7QAZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
112 123Right-handed alpha
Helix 2
AA2
A
146 155Right-handed alpha
Helix 3
AA3
A
182 185Right-handed 310
Helix 4
AA4
A
189 211Right-handed alpha
Helix 5
AA5
A
237 249Right-handed alpha
Helix 6
AA6
A
302 310Right-handed alpha
Helix 7
AA7
A
314 327Right-handed alpha
Helix 8
AA8
B
111 123Right-handed alpha
Helix 9
AA9
B
146 155Right-handed alpha
Helix 10
AB1
B
182 185Right-handed 310
Helix 11
AB2
B
189 211Right-handed alpha
Helix 12
AB3
B
237 249Right-handed alpha
Helix 13
AB4
B
302 310Right-handed alpha
Helix 14
AB5
B
314 327Right-handed alpha
Helix 15
AB6
C
112 123Right-handed alpha
Helix 16
AB7
C
146 155Right-handed alpha
Helix 17
AB8
C
181 186Right-handed alpha
Helix 18
AB9
C
189 211Right-handed alpha
Helix 19
AC1
C
237 251Right-handed alpha
Helix 20
AC2
C
302 309Right-handed alpha
Helix 21
AC3
C
314 327Right-handed alpha
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There are 6 sheets in PDB entry 7QAZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 141first strand
Strand 2
A
130 134anti-parallel
Strand 3
A
160 163anti-parallel
Strand 4
A
275 277anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 262first strand
Strand 2
A
170 180anti-parallel
Strand 3
A
224 236anti-parallel
Strand 4
A
215 219anti-parallel
Strand 5
A
291 293anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 141first strand
Strand 2
B
130 134anti-parallel
Strand 3
B
160 163anti-parallel
Strand 4
B
275 277anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
257 262first strand
Strand 2
B
170 180anti-parallel
Strand 3
B
224 236anti-parallel
Strand 4
B
215 219anti-parallel
Strand 5
B
291 293anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
137 141first strand
Strand 2
C
130 134anti-parallel
Strand 3
C
160 163anti-parallel
Strand 4
C
275 277anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
257 262first strand
Strand 2
C
170 180anti-parallel
Strand 3
C
224 236anti-parallel
Strand 4
C
216 219anti-parallel
Strand 5
C
291 293anti-parallel
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