Analysis of interatomic Contacts of Structural Units in PDB entry:
7QBT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QBT entry

There are 4 chains in PDB entry 7QBT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 411
B
 MET 1LEU 410
C
 GLU 2LEU 410
D
 MET 1ALA 70
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 7QBT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 56Right-handed 310
Helix 2
AA2
A
61 75Right-handed alpha
Helix 3
AA3
A
90 94Right-handed 310
Helix 4
AA4
A
96 106Right-handed alpha
Helix 5
AA5
A
126 133Right-handed alpha
Helix 6
AA6
A
146 155Right-handed alpha
Helix 7
AA7
A
158 173Right-handed alpha
Helix 8
AA8
A
187 202Right-handed alpha
Helix 9
AA9
A
214 218Right-handed 310
Helix 10
AB1
A
234 249Right-handed alpha
Helix 11
AB2
A
268 272Right-handed 310
Helix 12
AB3
A
273 278Right-handed alpha
Helix 13
AB4
A
295 306Right-handed alpha
Helix 14
AB5
A
319 323Right-handed 310
Helix 15
AB6
A
324 329Right-handed 310
Helix 16
AB7
A
349 357Right-handed alpha
Helix 17
AB8
A
376 381Right-handed alpha
Helix 18
AB9
A
384 407Right-handed alpha
Helix 19
AC1
B
51 56Right-handed 310
Helix 20
AC2
B
61 75Right-handed alpha
Helix 21
AC3
B
90 94Right-handed 310
Helix 22
AC4
B
96 106Right-handed alpha
Helix 23
AC5
B
126 133Right-handed alpha
Helix 24
AC6
B
146 154Right-handed alpha
Helix 25
AC7
B
158 173Right-handed alpha
Helix 26
AC8
B
187 202Right-handed alpha
Helix 27
AC9
B
214 218Right-handed 310
Helix 28
AD1
B
234 249Right-handed alpha
Helix 29
AD2
B
268 272Right-handed 310
Helix 30
AD3
B
273 278Right-handed alpha
Helix 31
AD4
B
295 306Right-handed alpha
Helix 32
AD5
B
319 323Right-handed 310
Helix 33
AD6
B
324 329Right-handed 310
Helix 34
AD7
B
349 357Right-handed alpha
Helix 35
AD8
B
376 381Right-handed alpha
Helix 36
AD9
B
384 407Right-handed alpha
Helix 37
AE1
C
51 56Right-handed 310
Helix 38
AE2
C
61 73Right-handed alpha
Helix 39
AE3
C
90 94Right-handed 310
Helix 40
AE4
C
96 106Right-handed alpha
Helix 41
AE5
C
126 133Right-handed alpha
Helix 42
AE6
C
146 154Right-handed alpha
Helix 43
AE7
C
158 173Right-handed alpha
Helix 44
AE8
C
187 202Right-handed alpha
Helix 45
AE9
C
214 218Right-handed 310
Helix 46
AF1
C
234 249Right-handed alpha
Helix 47
AF2
C
268 272Right-handed 310
Helix 48
AF3
C
273 278Right-handed alpha
Helix 49
AF4
C
292 306Right-handed alpha
Helix 50
AF5
C
319 323Right-handed 310
Helix 51
AF6
C
324 329Right-handed 310
Helix 52
AF7
C
349 357Right-handed alpha
Helix 53
AF8
C
376 381Right-handed alpha
Helix 54
AF9
C
384 407Right-handed alpha
Helix 55
AG1
D
51 56Right-handed 310
Helix 56
AG2
D
61 75Right-handed alpha
Helix 57
AG3
D
90 94Right-handed 310
Helix 58
AG4
D
96 106Right-handed alpha
Helix 59
AG5
D
126 133Right-handed alpha
Helix 60
AG6
D
146 154Right-handed alpha
Helix 61
AG7
D
158 173Right-handed alpha
Helix 62
AG8
D
187 202Right-handed alpha
Helix 63
AG9
D
214 218Right-handed 310
Helix 64
AH1
D
234 249Right-handed alpha
Helix 65
AH2
D
268 272Right-handed 310
Helix 66
AH3
D
273 278Right-handed alpha
Helix 67
AH4
D
295 306Right-handed alpha
Helix 68
AH5
D
319 323Right-handed 310
Helix 69
AH6
D
324 329Right-handed 310
Helix 70
AH7
D
349 357Right-handed alpha
Helix 71
AH8
D
376 381Right-handed alpha
Helix 72
AH9
D
384 407Right-handed alpha
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There are 8 sheets in PDB entry 7QBT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 6first strand
Strand 2
A
82 86parallel
Strand 3
A
111 116parallel
Strand 4
A
135 141parallel
Strand 5
A
174 181parallel
Strand 6
A
205 210parallel
Strand 7
A
253 257parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
310 314first strand
Strand 2
A
287 291parallel
Strand 3
A
339 342parallel
Strand 4
A
365 368parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 6first strand
Strand 2
B
82 86parallel
Strand 3
B
111 116parallel
Strand 4
B
135 141parallel
Strand 5
B
174 181parallel
Strand 6
B
205 210parallel
Strand 7
B
253 257parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
310 314first strand
Strand 2
B
287 291parallel
Strand 3
B
339 342parallel
Strand 4
B
365 368parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 6first strand
Strand 2
C
83 86parallel
Strand 3
C
111 116parallel
Strand 4
C
135 141parallel
Strand 5
C
174 181parallel
Strand 6
C
205 210parallel
Strand 7
C
253 257parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
310 314first strand
Strand 2
C
287 291parallel
Strand 3
C
339 342parallel
Strand 4
C
365 368parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2 6first strand
Strand 2
D
82 86parallel
Strand 3
D
111 116parallel
Strand 4
D
135 141parallel
Strand 5
D
174 181parallel
Strand 6
D
205 210parallel
Strand 7
D
253 257parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
310 314first strand
Strand 2
D
287 291parallel
Strand 3
D
339 342parallel
Strand 4
D
365 368parallel
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