Analysis of interatomic Contacts of Structural Units in PDB entry:
7QBZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QBZ entry

There is 1 chain in PDB entry 7QBZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 41ARG 678
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 7QBZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 60Right-handed alpha
Helix 2
AA2
A
72 97Right-handed alpha
Helix 3
AA3
A
100 115Right-handed alpha
Helix 4
AA4
A
117 138Right-handed alpha
Helix 5
AA5
A
145 151Right-handed alpha
Helix 6
AA6
A
171 173Right-handed 310
Helix 7
AA7
A
202 207Right-handed alpha
Helix 8
AA8
A
219 226Right-handed alpha
Helix 9
AA9
A
227 230Right-handed 310
Helix 10
AB1
A
258 269Right-handed alpha
Helix 11
AB2
A
275 296Right-handed alpha
Helix 12
AB3
A
312 325Right-handed alpha
Helix 13
AB4
A
326 347Right-handed alpha
Helix 14
AB5
A
353 360Right-handed alpha
Helix 15
AB6
A
391 404Right-handed alpha
Helix 16
AB7
A
408 423Right-handed alpha
Helix 17
AB8
A
466 479Right-handed alpha
Helix 18
AB9
A
505 516Right-handed alpha
Helix 19
AC1
A
528 540Right-handed alpha
Helix 20
AC2
A
549 562Right-handed alpha
Helix 21
AC3
A
572 574Right-handed 310
Helix 22
AC4
A
575 582Right-handed alpha
Helix 23
AC5
A
593 600Right-handed alpha
Helix 24
AC6
A
610 641Right-handed alpha
Helix 25
AC7
A
641 646Right-handed alpha
Helix 26
AC8
A
650 670Right-handed alpha
Helix 27
AC9
A
671 673Right-handed 310
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There are 4 sheets in PDB entry 7QBZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 169first strand
Strand 2
A
156 161anti-parallel
Strand 3
A
178 181anti-parallel
Strand 4
A
247 251anti-parallel
Strand 5
A
191 195anti-parallel
Strand 6
A
235 236anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 200first strand
Strand 2
A
212 214anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 351first strand
Strand 2
A
602 604anti-parallel
Strand 3
A
584 588parallel
Strand 4
A
565 570parallel
Strand 5
A
363 368parallel
Strand 6
A
520 524parallel
Strand 7
A
544 545parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
375 386first strand
Strand 2
A
491 502anti-parallel
Strand 3
A
482 488anti-parallel
Strand 4
A
447 452anti-parallel
Strand 5
A
439 444anti-parallel
Strand 6
A
430 435anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il