Analysis of interatomic Contacts of Structural Units in PDB entry:
7QCB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QCB entry

There is 1 chain in PDB entry 7QCB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1VAL 240
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7QCB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 9Right-handed alpha
Helix 2
AA2
A
9 21Right-handed alpha
Helix 3
AA3
A
23 49Right-handed alpha
Helix 4
AA4
A
51 64Right-handed alpha
Helix 5
AA5
A
80 91Right-handed alpha
Helix 6
AA6
A
101 112Right-handed alpha
Helix 7
AA7
A
152 159Right-handed alpha
Helix 8
AA8
A
178 194Right-handed alpha
Helix 9
AA9
A
205 211Right-handed alpha
Helix 10
AB1
A
218 223Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7QCB.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 119first strand
Strand 2
A
95 99parallel
Strand 3
A
73 75parallel
Strand 4
A
134 138parallel
Strand 5
A
160 170parallel
Strand 6
A
230 236anti-parallel
Strand 7
A
196 202anti-parallel
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