Analysis of interatomic Contacts of Structural Units in PDB entry:
7QCE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QCE entry

There are 2 chains in PDB entry 7QCE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 135LEU 321
B
 SER 156MET 320
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 7QCE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
168 170Right-handed 310
Helix 2
AA2
A
192 198Right-handed alpha
Helix 3
AA3
A
199 202Right-handed 310
Helix 4
AA4
A
227 241Right-handed alpha
Helix 5
AA5
A
243 258Right-handed alpha
Helix 6
AA6
A
264 283Right-handed alpha
Helix 7
AA7
A
284 288Right-handed 310
Helix 8
AA8
A
289 294Right-handed alpha
Helix 9
AA9
A
296 300Right-handed 310
Helix 10
AB1
A
302 321Right-handed alpha
Helix 11
AB2
B
168 170Right-handed 310
Helix 12
AB3
B
192 198Right-handed alpha
Helix 13
AB4
B
227 241Right-handed alpha
Helix 14
AB5
B
243 258Right-handed alpha
Helix 15
AB6
B
264 283Right-handed alpha
Helix 16
AB7
B
284 288Right-handed 310
Helix 17
AB8
B
289 294Right-handed alpha
Helix 18
AB9
B
296 300Right-handed 310
Helix 19
AC1
B
302 320Right-handed alpha
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There are 4 sheets in PDB entry 7QCE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 174first strand
Strand 2
A
189 191anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 217first strand
Strand 2
A
224 226anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 174first strand
Strand 2
B
189 191anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
215 217first strand
Strand 2
B
224 226anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il