Analysis of interatomic Contacts of Structural Units in PDB entry:
7QD0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QD0 entry

There is 1 chain in PDB entry 7QD0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2VAL 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7QD0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 9Right-handed alpha
Helix 2
AA2
A
19 29Right-handed alpha
Helix 3
AA3
A
32 46Right-handed alpha
Helix 4
AA4
A
47 51Right-handed 310
Helix 5
AA5
A
55 60Right-handed alpha
Helix 6
AA6
A
61 74Right-handed alpha
Helix 7
AA7
A
75 88Right-handed alpha
Helix 8
AA8
A
92 100Right-handed alpha
Helix 9
AA9
A
102 119Right-handed alpha
Helix 10
AB1
A
132 144Right-handed alpha
Helix 11
AB2
A
146 160Right-handed alpha
Helix 12
AB3
A
183 187Right-handed 310
Helix 13
AB4
A
197 209Right-handed alpha
Helix 14
AB5
A
211 217Right-handed alpha
Helix 15
AB6
A
235 247Right-handed alpha
Helix 16
AB7
A
263 265Right-handed 310
Helix 17
AB8
A
280 284Right-handed 310
Helix 18
AB9
A
310 316Right-handed 310
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There is 1 sheet (AA1) in PDB entry 7QD0.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 234first strand
Strand 2
A
219 226anti-parallel
Strand 3
A
300 307parallel
Strand 4
A
286 294anti-parallel
Strand 5
A
267 276anti-parallel
Strand 6
A
251 261anti-parallel
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