Analysis of interatomic Contacts of Structural Units in PDB entry:
7QFQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QFQ entry

There is 1 chain in PDB entry 7QFQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 1291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 7QFQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 28Right-handed 310
Helix 2
AA2
A
81 102Right-handed alpha
Helix 3
AA3
A
102 109Right-handed alpha
Helix 4
AA4
A
226 241Right-handed alpha
Helix 5
AA5
A
266 271Right-handed alpha
Helix 6
AA6
A
275 280Right-handed 310
Helix 7
AA7
A
281 306Right-handed alpha
Helix 8
AA8
A
317 329Right-handed alpha
Helix 9
AA9
A
341 354Right-handed alpha
Helix 10
AB1
A
357 366Right-handed alpha
Helix 11
AB2
A
409 412Right-handed 310
Helix 12
AB3
A
413 418Right-handed alpha
Helix 13
AB4
A
459 463Right-handed 310
Helix 14
AB5
A
465 469Right-handed 310
Helix 15
AB6
A
488 495Right-handed alpha
Helix 16
AB7
A
536 541Right-handed alpha
Helix 17
AB8
A
558 565Right-handed alpha
Helix 18
AB9
A
574 583Right-handed alpha
Helix 19
AC1
A
586 588Right-handed 310
Helix 20
AC2
A
589 606Right-handed alpha
Helix 21
AC3
A
623 628Right-handed alpha
Helix 22
AC4
A
638 647Right-handed alpha
Helix 23
AC5
A
648 650Right-handed 310
Helix 24
AC6
A
677 741Right-handed alpha
Helix 25
AC7
A
742 749Right-handed alpha
Helix 26
AC8
A
752 787Right-handed alpha
Helix 27
AC9
A
787 813Right-handed alpha
Helix 28
AD1
A
813 818Right-handed alpha
Helix 29
AD2
A
821 831Right-handed alpha
Helix 30
AD3
A
839 844Right-handed alpha
Helix 31
AD4
A
846 859Right-handed alpha
Helix 32
AD5
A
941 947Right-handed alpha
Helix 33
AD6
A
1070 1080Right-handed alpha
Helix 34
AD7
A
1263 1270Right-handed alpha
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There are 18 sheets in PDB entry 7QFQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 22first strand
Strand 2
A
34 40anti-parallel
Strand 3
A
43 45anti-parallel
Strand 4
A
158 160parallel
Strand 5
A
191 193parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 141first strand
Strand 2
A
151 155anti-parallel
Strand 3
A
507 508anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 177first strand
Strand 2
A
180 181anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 221first strand
Strand 2
A
200 203anti-parallel
Strand 3
A
378 381anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 332first strand
Strand 2
A
338 339anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 450first strand
Strand 2
A
433 437anti-parallel
Strand 3
A
527 531parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
471 472first strand
Strand 2
A
666 667parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
554 556first strand
Strand 2
A
568 570parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
868 870first strand
Strand 2
A
875 877anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
884 886first strand
Strand 2
A
910 912anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
899 901first strand
Strand 2
A
1054 1056anti-parallel
Strand 3
A
926 933anti-parallel
Strand 4
A
1003 1009anti-parallel
Strand 5
A
1014 1017anti-parallel
Strand 6
A
1022 1026anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
899 901first strand
Strand 2
A
1054 1056anti-parallel
Strand 3
A
926 933anti-parallel
Strand 4
A
1060 1062anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
982 987first strand
Strand 2
A
970 976anti-parallel
Strand 3
A
962 967anti-parallel
Strand 4
A
951 955anti-parallel
Strand 5
A
1041 1042anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1109 1112first strand
Strand 2
A
1119 1122anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1172 1173first strand
Strand 2
A
1176 1177anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1179 1181first strand
Strand 2
A
1194 1196anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1208 1211first strand
Strand 2
A
1222 1225anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1238 1245first strand
Strand 2
A
1252 1259anti-parallel
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