Analysis of interatomic Contacts of Structural Units in PDB entry:
7QFZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7QFZ entry

There are 8 chains in PDB entry 7QFZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 7	SER 293
B	GLU 8	SER 295
C	LEU 7	SER 295
D	GLY 6	SER 295
E	LEU 10	SER 295
F	GLU 8	SER 295
G	GLU 8	TYR 292
H	LEU 7	LEU 280

There are 88 helices in PDB entry 7QFZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	28	Right-handed alpha
Helix 2	AA2	A	32	41	Right-handed alpha
Helix 3	AA3	A	43	58	Right-handed alpha
Helix 4	AA4	A	84	95	Right-handed alpha
Helix 5	AA5	A	120	134	Right-handed alpha
Helix 6	AA6	A	201	204	Right-handed 310
Helix 7	AA7	A	205	210	Right-handed alpha
Helix 8	AA8	A	224	232	Right-handed alpha
Helix 9	AA9	A	245	255	Right-handed alpha
Helix 10	AB1	A	276	281	Right-handed 310
Helix 11	AB2	A	285	289	Right-handed 310
Helix 12	AB3	B	11	28	Right-handed alpha
Helix 13	AB4	B	32	41	Right-handed alpha
Helix 14	AB5	B	43	58	Right-handed alpha
Helix 15	AB6	B	84	95	Right-handed alpha
Helix 16	AB7	B	120	134	Right-handed alpha
Helix 17	AB8	B	201	204	Right-handed 310
Helix 18	AB9	B	205	210	Right-handed alpha
Helix 19	AC1	B	224	232	Right-handed alpha
Helix 20	AC2	B	247	255	Right-handed alpha
Helix 21	AC3	B	276	281	Right-handed 310
Helix 22	AC4	B	285	289	Right-handed 310
Helix 23	AC5	C	11	28	Right-handed alpha
Helix 24	AC6	C	32	41	Right-handed alpha
Helix 25	AC7	C	43	58	Right-handed alpha
Helix 26	AC8	C	84	95	Right-handed alpha
Helix 27	AC9	C	120	134	Right-handed alpha
Helix 28	AD1	C	201	204	Right-handed 310
Helix 29	AD2	C	205	210	Right-handed alpha
Helix 30	AD3	C	224	232	Right-handed alpha
Helix 31	AD4	C	247	255	Right-handed alpha
Helix 32	AD5	C	276	281	Right-handed 310
Helix 33	AD6	C	285	289	Right-handed 310
Helix 34	AD7	D	6	10	Right-handed 310
Helix 35	AD8	D	11	28	Right-handed alpha
Helix 36	AD9	D	32	41	Right-handed alpha
Helix 37	AE1	D	43	58	Right-handed alpha
Helix 38	AE2	D	84	95	Right-handed alpha
Helix 39	AE3	D	120	134	Right-handed alpha
Helix 40	AE4	D	201	204	Right-handed 310
Helix 41	AE5	D	205	210	Right-handed alpha
Helix 42	AE6	D	224	232	Right-handed alpha
Helix 43	AE7	D	245	255	Right-handed alpha
Helix 44	AE8	D	276	281	Right-handed 310
Helix 45	AE9	D	285	289	Right-handed 310
Helix 46	AF1	E	11	28	Right-handed alpha
Helix 47	AF2	E	32	41	Right-handed alpha
Helix 48	AF3	E	43	58	Right-handed alpha
Helix 49	AF4	E	84	95	Right-handed alpha
Helix 50	AF5	E	120	134	Right-handed alpha
Helix 51	AF6	E	201	204	Right-handed 310
Helix 52	AF7	E	205	210	Right-handed alpha
Helix 53	AF8	E	224	232	Right-handed alpha
Helix 54	AF9	E	247	255	Right-handed alpha
Helix 55	AG1	E	276	281	Right-handed 310
Helix 56	AG2	E	285	289	Right-handed 310
Helix 57	AG3	F	11	28	Right-handed alpha
Helix 58	AG4	F	32	41	Right-handed alpha
Helix 59	AG5	F	43	58	Right-handed alpha
Helix 60	AG6	F	84	95	Right-handed alpha
Helix 61	AG7	F	120	134	Right-handed alpha
Helix 62	AG8	F	201	204	Right-handed 310
Helix 63	AG9	F	205	210	Right-handed alpha
Helix 64	AH1	F	224	232	Right-handed alpha
Helix 65	AH2	F	245	255	Right-handed alpha
Helix 66	AH3	F	276	281	Right-handed 310
Helix 67	AH4	F	285	289	Right-handed 310
Helix 68	AH5	G	11	28	Right-handed alpha
Helix 69	AH6	G	32	41	Right-handed alpha
Helix 70	AH7	G	43	58	Right-handed alpha
Helix 71	AH8	G	84	95	Right-handed alpha
Helix 72	AH9	G	120	134	Right-handed alpha
Helix 73	AI1	G	201	204	Right-handed 310
Helix 74	AI2	G	205	210	Right-handed alpha
Helix 75	AI3	G	224	232	Right-handed alpha
Helix 76	AI4	G	245	255	Right-handed alpha
Helix 77	AI5	G	276	281	Right-handed 310
Helix 78	AI6	G	285	289	Right-handed 310
Helix 79	AI7	H	11	28	Right-handed alpha
Helix 80	AI8	H	32	41	Right-handed alpha
Helix 81	AI9	H	43	58	Right-handed alpha
Helix 82	AJ1	H	84	95	Right-handed alpha
Helix 83	AJ2	H	120	134	Right-handed alpha
Helix 84	AJ3	H	201	204	Right-handed 310
Helix 85	AJ4	H	205	210	Right-handed alpha
Helix 86	AJ5	H	225	232	Right-handed alpha
Helix 87	AJ6	H	245	255	Right-handed alpha
Helix 88	AJ7	H	276	280	Right-handed 310

There are 32 sheets in PDB entry 7QFZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	31	first strand
Strand 2	A	70	73	anti-parallel
Strand 3	A	62	65	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	111	first strand
Strand 2	B	147	160	parallel
Strand 3	B	165	171	anti-parallel
Strand 4	B	176	181	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	111	first strand
Strand 2	B	147	160	parallel
Strand 3	B	137	143	anti-parallel
Strand 4	B	185	190	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	176	181	first strand
Strand 2	A	165	171	anti-parallel
Strand 3	A	147	160	anti-parallel
Strand 4	A	137	143	anti-parallel
Strand 5	A	185	190	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	176	181	first strand
Strand 2	A	165	171	anti-parallel
Strand 3	A	147	160	anti-parallel
Strand 4	B	110	111	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	239	244	first strand
Strand 2	A	211	218	anti-parallel
Strand 3	A	272	274	anti-parallel
Strand 4	A	257	258	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	30	31	first strand
Strand 2	B	70	73	anti-parallel
Strand 3	B	62	65	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	239	244	first strand
Strand 2	B	211	218	anti-parallel
Strand 3	B	272	274	anti-parallel
Strand 4	B	257	258	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	30	31	first strand
Strand 2	C	70	73	anti-parallel
Strand 3	C	62	65	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	111	first strand
Strand 2	D	148	160	parallel
Strand 3	D	165	171	anti-parallel
Strand 4	D	176	181	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	110	111	first strand
Strand 2	D	148	160	parallel
Strand 3	D	137	142	anti-parallel
Strand 4	D	185	190	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	176	181	first strand
Strand 2	C	165	171	anti-parallel
Strand 3	C	147	160	anti-parallel
Strand 4	C	137	143	anti-parallel
Strand 5	C	185	190	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	176	181	first strand
Strand 2	C	165	171	anti-parallel
Strand 3	C	147	160	anti-parallel
Strand 4	D	110	111	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	239	244	first strand
Strand 2	C	211	218	anti-parallel
Strand 3	C	272	274	anti-parallel
Strand 4	C	257	258	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	30	31	first strand
Strand 2	D	70	73	anti-parallel
Strand 3	D	62	65	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	239	244	first strand
Strand 2	D	211	218	anti-parallel
Strand 3	D	272	274	anti-parallel
Strand 4	D	257	258	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	30	31	first strand
Strand 2	E	70	73	anti-parallel
Strand 3	E	62	65	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	110	111	first strand
Strand 2	F	147	160	parallel
Strand 3	F	165	171	anti-parallel
Strand 4	F	176	181	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	110	111	first strand
Strand 2	F	147	160	parallel
Strand 3	F	137	143	anti-parallel
Strand 4	F	185	190	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	176	181	first strand
Strand 2	E	165	171	anti-parallel
Strand 3	E	147	160	anti-parallel
Strand 4	E	137	143	anti-parallel
Strand 5	E	185	190	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	176	181	first strand
Strand 2	E	165	171	anti-parallel
Strand 3	E	147	160	anti-parallel
Strand 4	F	110	111	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	239	244	first strand
Strand 2	E	211	218	anti-parallel
Strand 3	E	272	274	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	30	31	first strand
Strand 2	F	70	73	anti-parallel
Strand 3	F	62	65	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	239	244	first strand
Strand 2	F	211	218	anti-parallel
Strand 3	F	272	274	anti-parallel
Strand 4	F	257	258	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	30	31	first strand
Strand 2	G	70	73	anti-parallel
Strand 3	G	62	65	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	110	111	first strand
Strand 2	H	148	160	parallel
Strand 3	H	165	171	anti-parallel
Strand 4	H	176	181	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	110	111	first strand
Strand 2	H	148	160	parallel
Strand 3	H	136	142	anti-parallel
Strand 4	H	185	191	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	176	181	first strand
Strand 2	G	165	171	anti-parallel
Strand 3	G	148	160	anti-parallel
Strand 4	G	136	142	anti-parallel
Strand 5	G	185	191	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	176	181	first strand
Strand 2	G	165	171	anti-parallel
Strand 3	G	148	160	anti-parallel
Strand 4	H	110	111	parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	239	244	first strand
Strand 2	G	211	218	anti-parallel
Strand 3	G	272	274	anti-parallel
Strand 4	G	257	258	parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	30	31	first strand
Strand 2	H	70	73	anti-parallel
Strand 3	H	62	65	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	239	244	first strand
Strand 2	H	211	218	anti-parallel
Strand 3	H	272	274	anti-parallel
Strand 4	H	257	258	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7QFZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7QFZ