Analysis of interatomic Contacts of Structural Units in PDB entry:
7QG6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7QG6 entry

There are 8 chains in PDB entry 7QG6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	ALA 66	VAL 186
D	LYS 767	LEU 1011
A	THR 65	GLU 188
B	LYS 767	VAL 1014
E	LEU 67	GLU 187
F	LYS 767	GLY 1012
G	ALA 66	VAL 186
H	LYS 767	LYS 1010

There are 74 helices in PDB entry 7QG6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	80	88	Right-handed alpha
Helix 2	AA2	C	123	132	Right-handed alpha
Helix 3	AA3	C	170	173	Right-handed 310
Helix 4	AA4	C	174	185	Right-handed alpha
Helix 5	AA5	D	769	781	Right-handed alpha
Helix 6	AA6	D	787	797	Right-handed alpha
Helix 7	AA7	D	802	815	Right-handed alpha
Helix 8	AA8	D	816	819	Right-handed 310
Helix 9	AA9	D	820	822	Right-handed 310
Helix 10	AB1	D	823	835	Right-handed alpha
Helix 11	AB2	D	838	860	Right-handed alpha
Helix 12	AB3	D	861	863	Right-handed 310
Helix 13	AB4	D	864	881	Right-handed alpha
Helix 14	AB5	D	885	899	Right-handed alpha
Helix 15	AB6	D	916	930	Right-handed alpha
Helix 16	AB7	D	931	933	Right-handed 310
Helix 17	AB8	D	936	958	Right-handed alpha
Helix 18	AB9	D	969	984	Right-handed alpha
Helix 19	AC1	D	992	1010	Right-handed alpha
Helix 20	AC2	A	80	89	Right-handed alpha
Helix 21	AC3	A	123	132	Right-handed alpha
Helix 22	AC4	A	174	186	Right-handed alpha
Helix 23	AC5	B	769	781	Right-handed alpha
Helix 24	AC6	B	787	797	Right-handed alpha
Helix 25	AC7	B	802	815	Right-handed alpha
Helix 26	AC8	B	816	819	Right-handed 310
Helix 27	AC9	B	820	822	Right-handed 310
Helix 28	AD1	B	823	835	Right-handed alpha
Helix 29	AD2	B	838	860	Right-handed alpha
Helix 30	AD3	B	861	863	Right-handed 310
Helix 31	AD4	B	864	881	Right-handed alpha
Helix 32	AD5	B	885	899	Right-handed alpha
Helix 33	AD6	B	916	930	Right-handed alpha
Helix 34	AD7	B	931	933	Right-handed 310
Helix 35	AD8	B	936	958	Right-handed alpha
Helix 36	AD9	B	969	984	Right-handed alpha
Helix 37	AE1	B	992	1011	Right-handed alpha
Helix 38	AE2	E	80	88	Right-handed alpha
Helix 39	AE3	E	122	132	Right-handed alpha
Helix 40	AE4	E	170	173	Right-handed 310
Helix 41	AE5	E	174	186	Right-handed alpha
Helix 42	AE6	F	769	781	Right-handed alpha
Helix 43	AE7	F	787	797	Right-handed alpha
Helix 44	AE8	F	802	815	Right-handed alpha
Helix 45	AE9	F	816	819	Right-handed 310
Helix 46	AF1	F	820	822	Right-handed 310
Helix 47	AF2	F	823	835	Right-handed alpha
Helix 48	AF3	F	840	860	Right-handed alpha
Helix 49	AF4	F	861	863	Right-handed 310
Helix 50	AF5	F	864	881	Right-handed alpha
Helix 51	AF6	F	885	899	Right-handed alpha
Helix 52	AF7	F	916	930	Right-handed alpha
Helix 53	AF8	F	931	933	Right-handed 310
Helix 54	AF9	F	936	958	Right-handed alpha
Helix 55	AG1	F	969	984	Right-handed alpha
Helix 56	AG2	F	992	1012	Right-handed alpha
Helix 57	AG3	G	80	89	Right-handed alpha
Helix 58	AG4	G	123	129	Right-handed alpha
Helix 59	AG5	G	174	185	Right-handed alpha
Helix 60	AG6	H	769	781	Right-handed alpha
Helix 61	AG7	H	787	797	Right-handed alpha
Helix 62	AG8	H	802	815	Right-handed alpha
Helix 63	AG9	H	816	819	Right-handed 310
Helix 64	AH1	H	820	822	Right-handed 310
Helix 65	AH2	H	823	835	Right-handed alpha
Helix 66	AH3	H	838	860	Right-handed alpha
Helix 67	AH4	H	861	863	Right-handed 310
Helix 68	AH5	H	864	881	Right-handed alpha
Helix 69	AH6	H	885	899	Right-handed alpha
Helix 70	AH7	H	916	930	Right-handed alpha
Helix 71	AH8	H	931	933	Right-handed 310
Helix 72	AH9	H	936	958	Right-handed alpha
Helix 73	AI1	H	969	984	Right-handed alpha
Helix 74	AI2	H	992	1010	Right-handed alpha

There are 8 sheets in PDB entry 7QG6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	94	100	first strand
Strand 2	C	112	118	anti-parallel
Strand 3	C	69	75	anti-parallel
Strand 4	C	147	150	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	137	first strand
Strand 2	C	143	145	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	94	100	first strand
Strand 2	A	112	118	anti-parallel
Strand 3	A	69	75	anti-parallel
Strand 4	A	147	150	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	135	137	first strand
Strand 2	A	143	145	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	94	100	first strand
Strand 2	E	113	118	anti-parallel
Strand 3	E	69	73	anti-parallel
Strand 4	E	147	150	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	135	137	first strand
Strand 2	E	143	145	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	94	100	first strand
Strand 2	G	112	118	anti-parallel
Strand 3	G	69	75	anti-parallel
Strand 4	G	147	150	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	135	137	first strand
Strand 2	G	143	145	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7QG6

Analysis of interatomic Contacts of Structural Units in PDB entry:
7QG6