Analysis of interatomic Contacts of Structural Units in PDB entry:
7QGP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QGP entry

There is 1 chain in PDB entry 7QGP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 23GLU 313
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7QGP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 34Right-handed 310
Helix 2
AA2
A
73 88Right-handed alpha
Helix 3
AA3
A
118 126Right-handed alpha
Helix 4
AA4
A
130 151Right-handed alpha
Helix 5
AA5
A
159 161Right-handed 310
Helix 6
AA6
A
179 189Right-handed alpha
Helix 7
AA7
A
200 204Right-handed 310
Helix 8
AA8
A
214 216Right-handed 310
Helix 9
AA9
A
217 233Right-handed alpha
Helix 10
AB1
A
241 252Right-handed alpha
Helix 11
AB2
A
259 263Right-handed 310
Helix 12
AB3
A
264 275Right-handed alpha
Helix 13
AB4
A
284 289Right-handed alpha
Helix 14
AB5
A
300 313Right-handed alpha
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There are 2 sheets in PDB entry 7QGP. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 45first strand
Strand 2
A
48 55anti-parallel
Strand 3
A
61 67anti-parallel
Strand 4
A
105 110anti-parallel
Strand 5
A
96 102anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 117first strand
Strand 2
A
163 165anti-parallel
Strand 3
A
171 173anti-parallel
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