Analysis of interatomic Contacts of Structural Units in PDB entry:
7QH3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QH3 entry

There are 4 chains in PDB entry 7QH3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 22ALA 153
B
 ALA 7VAL 154
C
 ASP 18VAL 154
D
 ASP 18VAL 154
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 7QH3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 28Right-handed 310
Helix 2
AA2
B
10 14Right-handed 310
Helix 3
AA3
B
18 23Right-handed alpha
Helix 4
AA4
B
24 28Right-handed 310
Helix 5
AA5
C
19 24Right-handed alpha
Helix 6
AA6
C
25 28Right-handed 310
Helix 7
AA7
D
19 24Right-handed alpha
Helix 8
AA8
D
25 28Right-handed 310
Back to top of page

There are 4 sheets in PDB entry 7QH3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 34first strand
Strand 2
A
38 45anti-parallel
Strand 3
A
52 60anti-parallel
Strand 4
A
63 72anti-parallel
Strand 5
A
86 92anti-parallel
Strand 6
A
97 105anti-parallel
Strand 7
A
108 113anti-parallel
Strand 8
A
121 126anti-parallel
Strand 9
A
132 139anti-parallel
Strand 10
A
143 153anti-parallel
Strand 11
A
29 34anti-parallel
Back to list of sheets
Back to top of page

There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 35first strand
Strand 2
B
38 45anti-parallel
Strand 3
B
52 60anti-parallel
Strand 4
B
63 72anti-parallel
Strand 5
B
86 92anti-parallel
Strand 6
B
97 105anti-parallel
Strand 7
B
108 113anti-parallel
Strand 8
B
121 126anti-parallel
Strand 9
B
132 138anti-parallel
Strand 10
B
146 153anti-parallel
Strand 11
B
29 35anti-parallel
Back to list of sheets
Back to top of page

There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
29 35first strand
Strand 2
C
37 45anti-parallel
Strand 3
C
52 60anti-parallel
Strand 4
C
63 73anti-parallel
Strand 5
C
86 92anti-parallel
Strand 6
C
97 105anti-parallel
Strand 7
C
108 112anti-parallel
Strand 8
C
121 126anti-parallel
Strand 9
C
132 138anti-parallel
Strand 10
C
144 153anti-parallel
Strand 11
C
29 35anti-parallel
Back to list of sheets
Back to top of page

There are 11 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
29 35first strand
Strand 2
D
38 45anti-parallel
Strand 3
D
52 59anti-parallel
Strand 4
D
64 72anti-parallel
Strand 5
D
86 92anti-parallel
Strand 6
D
97 105anti-parallel
Strand 7
D
108 112anti-parallel
Strand 8
D
121 126anti-parallel
Strand 9
D
132 139anti-parallel
Strand 10
D
143 153anti-parallel
Strand 11
D
29 35anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il