Analysis of interatomic Contacts of Structural Units in PDB entry:
7QHY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QHY entry

There are 2 chains in PDB entry 7QHY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO -1THR 234
B
 SER 1SER 245
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 7QHY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 23Right-handed alpha
Helix 2
AA2
A
37 50Right-handed alpha
Helix 3
AA3
A
53 66Right-handed alpha
Helix 4
AA4
A
78 85Right-handed alpha
Helix 5
AA5
A
86 96Right-handed alpha
Helix 6
AA6
A
103 109Right-handed alpha
Helix 7
AA7
A
111 126Right-handed alpha
Helix 8
AA8
A
156 166Right-handed alpha
Helix 9
AA9
A
172 184Right-handed alpha
Helix 10
AB1
A
218 223Right-handed alpha
Helix 11
AB2
B
8 24Right-handed alpha
Helix 12
AB3
B
37 50Right-handed alpha
Helix 13
AB4
B
53 66Right-handed alpha
Helix 14
AB5
B
78 85Right-handed alpha
Helix 15
AB6
B
86 96Right-handed alpha
Helix 16
AB7
B
103 109Right-handed alpha
Helix 17
AB8
B
111 126Right-handed alpha
Helix 18
AB9
B
156 166Right-handed alpha
Helix 19
AC1
B
172 185Right-handed alpha
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There are 2 sheets in PDB entry 7QHY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 76first strand
Strand 2
A
30 36parallel
Strand 3
A
1 7parallel
Strand 4
A
151 153parallel
Strand 5
A
170 171parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 76first strand
Strand 2
B
31 36parallel
Strand 3
B
2 7parallel
Strand 4
B
151 153parallel
Strand 5
B
170 171parallel
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