Analysis of interatomic Contacts of Structural Units in PDB entry:
7QJT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QJT entry

There is 1 chain in PDB entry 7QJT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1HIS 267
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7QJT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 17Right-handed alpha
Helix 2
AA2
A
62 65Right-handed 310
Helix 3
AA3
A
66 75Right-handed alpha
Helix 4
AA4
A
91 109Right-handed alpha
Helix 5
AA5
A
111 116Right-handed alpha
Helix 6
AA6
A
129 142Right-handed alpha
Helix 7
AA7
A
183 191Right-handed alpha
Helix 8
AA8
A
208 212Right-handed 310
Helix 9
AA9
A
214 230Right-handed alpha
Helix 10
AB1
A
235 240Right-handed alpha
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There are 2 sheets in PDB entry 7QJT. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 28first strand
Strand 2
A
38 44anti-parallel
Strand 3
A
79 84anti-parallel
Strand 4
A
50 56parallel
Strand 5
A
118 128parallel
Strand 6
A
147 151parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 172first strand
Strand 2
A
197 202parallel
Strand 3
A
251 256anti-parallel
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