Analysis of interatomic Contacts of Structural Units in PDB entry:
7QL5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7QL5 entry

There are 5 chains in PDB entry 7QL5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 1GLU 432
B
SER 1ALA 469
C
VAL 1ALA 501
D
SER 1VAL 425
E
ASN 2PRO 489
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 7QL5. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
1 12Right-handed alpha
Helix 2
AA2
A
63 66Right-handed 310
Helix 3
AA3
A
68 73Right-handed 310
Helix 4
AA4
A
83 85Right-handed 310
Helix 5
AA5
A
152 157Right-handed alpha
Helix 6
AA6
A
211 232Right-handed alpha
Helix 7
AA7
A
236 240Right-handed 310
Helix 8
AA8
A
241 262Right-handed alpha
Helix 9
AA9
A
272 300Right-handed alpha
Helix 10
AB1
A
309 324Right-handed alpha
Helix 11
AB2
A
375 432Right-handed alpha
Helix 12
AB3
B
2 12Right-handed alpha
Helix 13
AB4
B
68 72Right-handed 310
Helix 14
AB5
B
81 85Right-handed 310
Helix 15
AB6
B
177 180Right-handed 310
Helix 16
AB7
B
224 238Right-handed alpha
Helix 17
AB8
B
239 241Right-handed 310
Helix 18
AB9
B
247 267Right-handed alpha
Helix 19
AC1
B
278 306Right-handed alpha
Helix 20
AC2
B
315 331Right-handed alpha
Helix 21
AC3
B
406 459Right-handed alpha
Helix 22
AC4
C
2 13Right-handed alpha
Helix 23
AC5
C
70 75Right-handed 310
Helix 24
AC6
C
225 246Right-handed alpha
Helix 25
AC7
C
247 249Right-handed 310
Helix 26
AC8
C
255 277Right-handed alpha
Helix 27
AC9
C
286 314Right-handed alpha
Helix 28
AD1
C
323 339Right-handed alpha
Helix 29
AD2
C
420 478Right-handed alpha
Helix 30
AD3
D
2 12Right-handed alpha
Helix 31
AD4
D
68 73Right-handed 310
Helix 32
AD5
D
81 85Right-handed 310
Helix 33
AD6
D
211 235Right-handed alpha
Helix 34
AD7
D
236 240Right-handed 310
Helix 35
AD8
D
241 264Right-handed alpha
Helix 36
AD9
D
272 300Right-handed alpha
Helix 37
AE1
D
309 319Right-handed alpha
Helix 38
AE2
D
379 425Right-handed alpha
Helix 39
AE3
E
3 12Right-handed alpha
Helix 40
AE4
E
68 73Right-handed 310
Helix 41
AE5
E
83 85Right-handed 310
Helix 42
AE6
E
174 178Right-handed 310
Helix 43
AE7
E
219 226Right-handed alpha
Helix 44
AE8
E
226 237Right-handed alpha
Helix 45
AE9
E
238 243Right-handed 310
Helix 46
AF1
E
250 273Right-handed alpha
Helix 47
AF2
E
281 310Right-handed alpha
Helix 48
AF3
E
318 333Right-handed alpha
Helix 49
AF4
E
420 472Right-handed alpha
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There are 19 sheets in PDB entry 7QL5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
77 81first strand
Strand 2
A
107 111anti-parallel
Strand 3
A
115 118anti-parallel
Strand 4
A
49 61anti-parallel
Strand 5
A
121 127anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
77 81first strand
Strand 2
A
107 111anti-parallel
Strand 3
A
115 118anti-parallel
Strand 4
A
49 61anti-parallel
Strand 5
A
31 44anti-parallel
Strand 6
A
158 160parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
91 92first strand
Strand 2
A
139 147anti-parallel
Strand 3
A
198 209anti-parallel
Strand 4
A
176 188anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
77 80first strand
Strand 2
B
108 111anti-parallel
Strand 3
B
115 118anti-parallel
Strand 4
B
49 61anti-parallel
Strand 5
B
29 44anti-parallel
Strand 6
B
156 160parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
121 127first strand
Strand 2
B
49 61anti-parallel
Strand 3
B
29 44anti-parallel
Strand 4
B
174 175parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
90 92first strand
Strand 2
B
139 148anti-parallel
Strand 3
B
205 215anti-parallel
Strand 4
B
186 190anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
90 92first strand
Strand 2
B
139 148anti-parallel
Strand 3
B
205 215anti-parallel
Strand 4
B
193 197anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
80 82first strand
Strand 2
C
110 112anti-parallel
Strand 3
C
115 120anti-parallel
Strand 4
C
51 68anti-parallel
Strand 5
C
123 129anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
80 82first strand
Strand 2
C
110 112anti-parallel
Strand 3
C
115 120anti-parallel
Strand 4
C
51 68anti-parallel
Strand 5
C
31 46anti-parallel
Strand 6
C
158 162parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
92 94first strand
Strand 2
C
141 150anti-parallel
Strand 3
C
213 223anti-parallel
Strand 4
C
190 194anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
92 94first strand
Strand 2
C
141 150anti-parallel
Strand 3
C
213 223anti-parallel
Strand 4
C
197 201anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
164 167first strand
Strand 2
C
170 173anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
77 80first strand
Strand 2
D
108 111anti-parallel
Strand 3
D
115 118anti-parallel
Strand 4
D
49 61anti-parallel
Strand 5
D
121 127anti-parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
77 80first strand
Strand 2
D
108 111anti-parallel
Strand 3
D
115 118anti-parallel
Strand 4
D
49 61anti-parallel
Strand 5
D
31 44anti-parallel
Strand 6
D
158 160parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
91 92first strand
Strand 2
D
139 147anti-parallel
Strand 3
D
198 209anti-parallel
Strand 4
D
176 188anti-parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
77 81first strand
Strand 2
E
107 111anti-parallel
Strand 3
E
113 118anti-parallel
Strand 4
E
49 66anti-parallel
Strand 5
E
121 127anti-parallel
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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
77 81first strand
Strand 2
E
107 111anti-parallel
Strand 3
E
113 118anti-parallel
Strand 4
E
49 66anti-parallel
Strand 5
E
29 44anti-parallel
Strand 6
E
156 160parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
90 92first strand
Strand 2
E
139 148anti-parallel
Strand 3
E
207 217anti-parallel
Strand 4
E
184 188anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
90 92first strand
Strand 2
E
139 148anti-parallel
Strand 3
E
207 217anti-parallel
Strand 4
E
191 195anti-parallel
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